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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
Asp_trna and dnaQ are separated by 132 nucleotides
dnaQ and rnhA are separated by 55 nucleotides
rnhA and yafS overlap by 4 nucleotides
yafS and gloB are separated by 33 nucleotides
NOLOHH_02305: Asp_trna - tRNA-Asp(gtc), at 371,930 to 372,006
_trna
NOLOHH_02310: dnaQ - DNA polymerase III subunit epsilon, at 372,139 to 372,879
dnaQ
NOLOHH_02315: rnhA - ribonuclease HI, at 372,935 to 373,402
rnhA
NOLOHH_02320: yafS - Uncharacterized protein YafS, at 373,399 to 374,121
yafS
NOLOHH_02325: gloB - hydroxyacylglutathione hydrolase, at 374,155 to 374,910
gloB
Group
Condition
NOLOHH
_02305
NOLOHH
_02310
NOLOHH
_02315
NOLOHH
_02320
NOLOHH
_02325
Asp_trna
dnaQ
rnhA
yafS
gloB
phage
Bas69
N.D.
N.D.
-2.4
-0.3
+0.2
phage
K5
N.D.
N.D.
-0.8
-0.1
+0.0
phage
Bas67
N.D.
N.D.
-1.3
-0.0
+0.6
no phage control
Control_ECOR27
N.D.
N.D.
-1.0
+0.2
+0.1
carbon source
L-Rhamnose
N.D.
N.D.
+0.6
-0.2
-1.0
phage
Bas09
N.D.
N.D.
-0.5
+0.2
-0.2
phage
TP2
N.D.
N.D.
-0.6
-0.0
+0.2
phage
TP7
N.D.
N.D.
-0.4
-0.2
+0.2
carbon source
D-Glucose
N.D.
N.D.
-1.0
+0.2
+0.3
carbon source
L-Arabinose
N.D.
N.D.
+0.3
-0.6
-0.0
phage
RB49
N.D.
N.D.
-0.1
-0.1
-0.1
carbon source
Casamino-acids
N.D.
N.D.
-0.2
-0.5
+0.4
phage
K5
N.D.
N.D.
-0.2
+0.0
+0.1
phage
Bas67
N.D.
N.D.
-0.3
-0.0
+0.4
phage
TP12
N.D.
N.D.
+0.1
+0.1
-0.1
carbon source
Casamino-acids
N.D.
N.D.
+0.0
-0.0
+0.1
carbon source
L-Rhamnose
N.D.
N.D.
+0.5
-0.1
-0.2
phage
TP12
N.D.
N.D.
+0.3
+0.2
-0.1
carbon source
L-Arabinose
N.D.
N.D.
+0.2
+0.0
+0.3
carbon source
D-Glucose
N.D.
N.D.
+0.1
+0.2
+0.2
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.3
-0.0
+0.2
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.2
+0.2
+0.3
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