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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
yahB and pdeL are separated by 41 nucleotides
pdeL and ehaA are separated by 141 nucleotides
ehaA and betT are separated by 572 nucleotides
betT and betI are separated by 128 nucleotides
NOLOHH_01870: yahB - Uncharacterized HTH-type transcriptional regulator YahB, at 272,038 to 272,970
yahB
NOLOHH_01875: pdeL - Cyclic di-GMP phosphodiesterase PdeL, at 273,012 to 274,100
pdeL
NOLOHH_01880: ehaA - autotransporter adhesin EhaA, at 274,242 to 278,225
ehaA
NOLOHH_01885: betT - choline BCCT transporter BetT, at 278,798 to 280,831
betT
NOLOHH_01890: betI - transcriptional regulator BetI, at 280,960 to 281,547
betI
Group
Condition
NOLOHH
_01870
NOLOHH
_01875
NOLOHH
_01880
NOLOHH
_01885
NOLOHH
_01890
yahB
pdeL
ehaA
betT
betI
phage
TP2
+0.1
+0.2
-0.2
-0.3
-0.6
carbon source
D-Glucose
+0.0
-0.1
-0.0
-0.1
-0.2
carbon source
L-Arabinose
+0.3
+0.0
-0.1
+0.1
-0.7
phage
K5
+0.0
+0.0
-0.2
-0.0
-0.2
carbon source
L-Arabinose
+0.0
-0.0
-0.0
-0.0
-0.2
carbon source
Sodium-DL-Lactate
+0.2
+0.1
-0.0
-0.0
-0.4
carbon source
L-Rhamnose
-0.1
-0.1
+0.1
-0.1
+0.0
phage
TP12
-0.0
+0.4
-0.1
-0.0
-0.5
carbon source
D-Glucose
+0.1
-0.2
+0.1
-0.1
+0.1
phage
K5
-0.0
+0.2
-0.1
+0.1
-0.2
phage
Bas67
+0.1
+0.2
-0.0
-0.1
-0.0
carbon source
Casamino-acids
-0.1
+0.1
+0.0
-0.0
+0.1
carbon source
Casamino-acids
+0.1
+0.1
-0.0
-0.2
+0.2
carbon source
Sodium-DL-Lactate
-0.1
+0.3
+0.0
+0.1
-0.1
carbon source
L-Rhamnose
+0.3
+0.3
-0.1
-0.3
+0.1
phage
RB49
+0.0
+0.5
-0.1
+0.1
-0.1
no phage control
Control_ECOR27
+0.2
-0.0
+0.1
+0.0
+0.2
phage
Bas69
+0.0
+0.4
-0.1
+0.0
+0.3
phage
Bas67
+0.1
+0.3
+0.1
+0.1
+0.1
phage
Bas09
+0.1
+0.6
+0.0
-0.1
+0.2
phage
TP7
-0.0
+0.3
+0.0
-0.1
+0.7
phage
TP12
+0.1
+0.3
-0.0
-0.0
+0.5
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