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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
pdeB and ybaA are separated by 41 nucleotides
ybaA and atl are separated by 378 nucleotides
atl and ybaY are separated by 30 nucleotides
ybaY and tesB are separated by 217 nucleotides
NOLOHH_01165: pdeB - cyclic-guanylate-specific phosphodiesterase PdeB, at 125,317 to 126,867
pdeB
NOLOHH_01170: ybaA - Uncharacterized protein YbaA, at 126,909 to 127,262
ybaA
NOLOHH_01180: atl - DNA base-flipping protein, at 127,641 to 127,952
atl
NOLOHH_01185: ybaY - Uncharacterized lipoprotein YbaY, at 127,983 to 128,555
ybaY
NOLOHH_01190: tesB - acyl-CoA thioesterase II, at 128,773 to 129,633
tesB
Group
Condition
NOLOHH
_01165
NOLOHH
_01170
NOLOHH
_01180
NOLOHH
_01185
NOLOHH
_01190
pdeB
ybaA
atl
ybaY
tesB
carbon source
D-Glucose
+0.0
-5.2
-0.4
-0.4
+0.5
carbon source
L-Rhamnose
+0.1
-2.0
-0.7
+0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.2
-1.7
-0.3
+0.1
+0.1
carbon source
Casamino-acids
+0.1
-2.0
-0.0
+0.4
+0.1
no phage control
Control_ECOR27
+0.1
-1.4
+0.2
+0.4
-0.1
carbon source
D-Glucose
+0.2
-1.1
+0.2
-0.0
+0.1
phage
Bas69
-0.5
+1.0
-0.4
-0.5
-0.1
phage
K5
-0.2
-0.3
-0.0
+0.1
+0.1
phage
TP7
-0.3
+0.1
-0.3
+0.3
+0.1
phage
TP12
-0.1
-0.0
-0.4
+0.4
+0.0
phage
Bas67
-0.1
+0.3
-0.5
+0.4
-0.1
carbon source
Casamino-acids
+0.1
+0.0
-0.0
+0.0
-0.0
carbon source
L-Arabinose
+0.1
-0.9
+0.3
+0.4
+0.4
phage
TP2
-0.5
+1.3
-0.1
-0.5
+0.1
carbon source
Sodium-DL-Lactate
-0.1
+0.5
-0.4
+0.3
+0.1
carbon source
L-Arabinose
+0.3
+0.8
-0.9
+0.2
+0.2
phage
K5
+0.2
+0.5
-0.3
+0.2
+0.0
phage
Bas09
-0.0
+0.3
+0.2
+0.4
+0.1
carbon source
L-Rhamnose
+0.2
+0.5
+0.2
+0.1
+0.2
phage
TP12
+0.1
+1.0
+0.0
-0.0
+0.2
phage
Bas67
+0.1
+0.2
+0.5
+0.2
+0.2
phage
RB49
-0.1
+1.3
-0.4
+0.6
+0.2
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