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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
rusA and ybcO overlap by 4 nucleotides
ybcO and NOLOHH_00640 overlap by 8 nucleotides
NOLOHH_00640 and ybcN overlap by 1 nucleotides
ybcN and NOLOHH_00650 are separated by 537 nucleotides
NOLOHH_00630: rusA - crossover junction endodeoxyribonuclease RusA, at 24,188 to 24,550
rusA
NOLOHH_00635: ybcO - Putative nuclease YbcO, at 24,547 to 24,837
ybcO
NOLOHH_00640: NOLOHH_00640 - NINE Protein, at 24,830 to 25,000
_00640
NOLOHH_00645: ybcN - DNA base-flipping protein YbcN, at 25,000 to 25,455
ybcN
NOLOHH_00650: NOLOHH_00650 - hypothetical protein, at 25,993 to 26,127
_00650
Group
Condition
NOLOHH
_00630
NOLOHH
_00635
NOLOHH
_00640
NOLOHH
_00645
NOLOHH
_00650
rusA
ybcO
ybcN
phage
Bas69
N.D.
-1.0
-0.1
-0.5
-1.5
carbon source
L-Arabinose
N.D.
+0.8
-0.0
-0.6
-1.9
no phage control
Control_ECOR27
N.D.
-0.8
-0.2
-0.5
-0.2
phage
K5
N.D.
-0.5
+0.0
-0.5
-0.4
phage
Bas67
N.D.
-0.6
+0.1
-0.1
-0.7
carbon source
Casamino-acids
N.D.
-0.0
-0.2
-0.1
-0.8
carbon source
D-Glucose
N.D.
-0.1
+0.1
-0.2
-0.7
carbon source
L-Rhamnose
N.D.
-0.3
-0.4
-0.2
+0.0
phage
K5
N.D.
-0.5
+0.0
-0.2
-0.2
carbon source
Sodium-DL-Lactate
N.D.
-0.1
-0.6
-0.1
+0.1
phage
RB49
N.D.
+0.1
+0.0
-0.3
-0.5
carbon source
Casamino-acids
N.D.
-0.1
-0.2
+0.2
-0.5
phage
Bas09
N.D.
-0.3
+0.1
-0.4
+0.5
phage
TP12
N.D.
+0.0
+0.5
-0.2
-0.4
phage
Bas67
N.D.
-0.1
+0.1
-0.2
+0.1
carbon source
Sodium-DL-Lactate
N.D.
+0.2
-0.2
+0.1
-0.1
carbon source
L-Rhamnose
N.D.
+0.7
-0.5
+0.1
-0.1
phage
TP7
N.D.
+0.1
-0.1
-0.5
+0.7
carbon source
D-Glucose
N.D.
-0.5
-0.2
-0.0
+1.4
phage
TP2
N.D.
+0.3
+0.2
+0.0
+0.3
carbon source
L-Arabinose
N.D.
+0.5
-0.7
+0.1
+1.4
phage
TP12
N.D.
-0.2
+0.3
+0.1
+1.2
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