Fitness for 5 genes in Escherichia coli ECRC102

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500 ntdosC and dosP are separated by 24 nucleotidesdosP and dosP overlap by 4 nucleotidesdosP and ddpX are separated by 257 nucleotidesddpX and ddpA are separated by 13 nucleotides NIAGMN_25430: dosC - diguanylate cyclase DosC, at 4,957,529 to 4,958,911 dosC NIAGMN_25435: dosP - oxygen-sensing cyclic-di-GMP phosphodiesterase, at 4,958,936 to 4,960,177 dosP NIAGMN_25440: dosP - oxygen-sensing cyclic-di-GMP phosphodiesterase, at 4,960,174 to 4,961,325 dosP NIAGMN_25445: ddpX - D-alanyl-D-alanine dipeptidase, at 4,961,583 to 4,962,164 ddpX NIAGMN_25450: ddpA - putative D,D-dipeptide-binding periplasmic protein DdpA, at 4,962,178 to 4,963,728 ddpA
Group Condition NIAGMN_25430 NIAGMN_25435 NIAGMN_25440 NIAGMN_25445 NIAGMN_25450
dosC dosP dosP ddpX ddpA
carbon source Casamino-acids -0.8 -1.0 N.D. -0.5 -0.5
carbon source L-Arabinose -0.5 +0.3 N.D. -1.2 -0.9
phage RB68 -0.2 -1.8 N.D. +0.2 +0.3
carbon source L-Arabinose -0.1 -1.1 N.D. -0.1 -0.2
phage Bas14 +0.2 -0.1 N.D. -0.7 -0.6
carbon source D-Glucose -0.4 -0.6 N.D. +0.3 +0.3
carbon source Casamino-acids -0.0 +0.3 N.D. -0.4 -0.1
carbon source D-Glucose -0.0 -0.0 N.D. +0.0 -0.1
phage Bas61 -0.3 +0.6 N.D. +0.7 -0.6
phage EV240 -0.3 +0.4 N.D. +0.1 +0.3
carbon source Sodium-DL-Lactate +0.2 +0.4 N.D. -0.0 +0.0
phage Bas14 -0.2 -0.3 N.D. +0.5 +0.6
carbon source Sodium-DL-Lactate +0.3 +0.6 N.D. -0.0 -0.2
phage TP9 -0.1 +0.2 N.D. +0.1 +0.9
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