Fitness for 5 genes in Escherichia coli ECRC102

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500 ntuxaB and yneE are separated by 196 nucleotidesyneE and tam are separated by 3 nucleotidestam and lsrG are separated by 56 nucleotideslsrG and lsrF are separated by 23 nucleotides NIAGMN_25275: uxaB - tagaturonate reductase, at 4,911,309 to 4,912,760 uxaB NIAGMN_25280: yneE - UPF0187 protein YneE, at 4,912,957 to 4,913,871 yneE NIAGMN_25285: tam - trans-aconitate 2-methyltransferase, at 4,913,875 to 4,914,633 tam NIAGMN_25290: lsrG - (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase, at 4,914,690 to 4,914,980 lsrG NIAGMN_25295: lsrF - 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase, at 4,915,004 to 4,915,879 lsrF
Group Condition NIAGMN_25275 NIAGMN_25280 NIAGMN_25285 NIAGMN_25290 NIAGMN_25295
uxaB yneE tam lsrG lsrF
carbon source Sodium-DL-Lactate -0.1 +0.0 -0.7 -1.0 -1.4
phage EV240 -0.1 -0.4 -1.4 +0.2 -0.8
carbon source Sodium-DL-Lactate +0.1 +0.1 +0.3 -0.3 -2.4
carbon source L-Arabinose -0.4 +0.1 -0.5 -0.9 +0.4
phage RB68 +0.3 +0.3 -0.3 -1.0 -0.3
phage Bas14 +0.4 -1.0 +0.5 +0.3 -0.6
phage Bas61 +0.1 -0.8 +0.2 +0.6 -0.2
phage TP9 -0.1 -0.2 +0.7 +0.4 -0.7
phage Bas14 +0.1 -1.0 +1.0 +0.5 -0.4
carbon source D-Glucose -0.4 +0.2 -0.6 +0.3 +0.8
carbon source D-Glucose +0.2 -0.2 -0.1 +0.0 +0.3
carbon source L-Arabinose +0.6 -0.8 +0.4 -0.2 +0.5
carbon source Casamino-acids -0.2 +0.1 +0.6 -0.1 +0.2
carbon source Casamino-acids +0.6 +0.9 +0.0 +0.5 +0.8
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