Fitness for 5 genes in Escherichia coli ECRC102

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500 ntcgsE and cgsD are separated by 4 nucleotidescgsD and csgB are separated by 753 nucleotidescsgB and csgA are separated by 40 nucleotidescsgA and csgC are separated by 58 nucleotides NIAGMN_23980: cgsE - curli production assembly/transport protein CsgE, at 4,695,034 to 4,695,423 cgsE NIAGMN_23985: cgsD - transcriptional regulator CsgD, at 4,695,428 to 4,696,078 cgsD NIAGMN_23995: csgB - curlin minor subunit CsgB, at 4,696,832 to 4,697,287 csgB NIAGMN_24000: csgA - curlin major subunit CsgA, at 4,697,328 to 4,697,786 csgA NIAGMN_24005: csgC - curli assembly protein CsgC, at 4,697,845 to 4,698,177 csgC
Group Condition NIAGMN_23980 NIAGMN_23985 NIAGMN_23995 NIAGMN_24000 NIAGMN_24005
cgsE cgsD csgB csgA csgC
phage RB68 N.D. N.D. -0.2 +0.1 -1.3
carbon source L-Arabinose N.D. N.D. -0.5 -1.5 +0.6
carbon source Sodium-DL-Lactate N.D. N.D. +0.1 -0.3 -0.3
phage EV240 N.D. N.D. +0.4 +0.5 -1.2
carbon source Casamino-acids N.D. N.D. +0.4 -0.9 +0.5
carbon source D-Glucose N.D. N.D. -0.3 -0.3 +0.7
carbon source L-Arabinose N.D. N.D. +0.6 +0.2 -0.6
carbon source D-Glucose N.D. N.D. +0.8 -0.6 +0.3
phage TP9 N.D. N.D. -0.2 +0.4 +0.2
carbon source Sodium-DL-Lactate N.D. N.D. -0.1 +0.5 +0.3
phage Bas61 N.D. N.D. +0.9 +0.3 -0.3
phage Bas14 N.D. N.D. +0.4 +0.2 +0.4
carbon source Casamino-acids N.D. N.D. -0.0 +0.8 +0.4
phage Bas14 N.D. N.D. +0.6 +0.3 +0.4
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