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Protein
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Fitness for 5 genes in
Acinetobacter radioresistens SK82
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX26_01997 and MPMX26_01998 overlap by 4 nucleotides
MPMX26_01998 and MPMX26_01999 are separated by 384 nucleotides
MPMX26_01999 and MPMX26_02000 are separated by 17 nucleotides
MPMX26_02000 and MPMX26_02001 are separated by 56 nucleotides
MPMX26_01997: MPMX26_01997 - Succinate-semialdehyde dehydrogenase [NADP(+)] GabD, at 2,056,881 to 2,058,329
_01997
MPMX26_01998: MPMX26_01998 - 4-aminobutyrate aminotransferase PuuE, at 2,058,326 to 2,059,606
_01998
MPMX26_01999: MPMX26_01999 - Gamma-aminobutyraldehyde dehydrogenase, at 2,059,991 to 2,061,421
_01999
MPMX26_02000: MPMX26_02000 - hypothetical protein, at 2,061,439 to 2,062,209
_02000
MPMX26_02001: MPMX26_02001 - hypothetical protein, at 2,062,266 to 2,062,985
_02001
Group
Condition
MPMX26
_01997
MPMX26
_01998
MPMX26
_01999
MPMX26
_02000
MPMX26
_02001
carbon source
L-tyrosine (C)
+0.2
+0.2
N.D.
-0.8
-2.4
carbon source
L-tyrosine (C)
+0.3
+0.2
N.D.
-0.5
-2.3
stress
TSB with Dermcidin 2 ug/mL
-0.8
-1.7
N.D.
-0.2
+0.5
stress
TSB with Dermcidin 2 ug/mL
-1.0
-1.4
N.D.
-0.1
+0.4
no stress control
no stress control
-0.9
-1.1
N.D.
-0.3
+0.5
stress
TSB with Dermcidin 2 ug/mL
-0.7
-1.2
N.D.
-0.4
+0.4
no stress control
no stress control
-0.8
-1.3
N.D.
-0.3
+0.5
uv
UV exposure at 150J/m2 for 10 seconds
-0.6
-0.8
N.D.
-0.1
-0.2
uv
UV exposure at 150J/m2 for 20 seconds
-0.5
-0.7
N.D.
-0.3
-0.2
uv
UV exposure at 150J/m2 for 20 seconds
-0.6
-0.6
N.D.
-0.3
-0.2
no uv control
no UV control
-0.4
-0.9
N.D.
-0.2
-0.3
stress
TSB with Dermcidin 1 ug/mL
-0.6
-1.4
N.D.
-0.1
+0.5
stress
TSB with Dermcidin 1 ug/mL
-0.6
-1.3
N.D.
-0.1
+0.5
uv
UV exposure at 150J/m2 for 10 seconds
-0.4
-0.5
N.D.
-0.4
-0.1
uv
UV exposure at 150J/m2 for 20 seconds
-0.5
-0.6
N.D.
-0.1
-0.2
no uv control
no UV control
-0.4
-0.5
N.D.
-0.3
-0.3
no uv control
no UV control
-0.5
-0.5
N.D.
-0.2
-0.1
uv
UV exposure at 150J/m2 for 10 seconds
-0.5
-0.5
N.D.
-0.2
-0.2
stress
TSB with Dermcidin 1 ug/mL
-0.7
-1.1
N.D.
-0.0
+0.5
carbon source
L-Glutamine (C)
+0.4
+0.5
N.D.
-0.6
-1.6
carbon source
L-Proline (C)
+0.2
+0.5
N.D.
-0.4
-1.0
nitrogen source
L-Arginine (N)
+0.3
+0.3
N.D.
-0.1
-0.8
nitrogen source
L-Serine (N)
+0.2
+1.1
N.D.
-0.2
-1.2
nitrogen source
L-Aspartic Acid (N)
+0.2
+0.5
N.D.
-0.3
-0.5
nitrogen source
Urea (N)
+0.3
+0.4
N.D.
-0.0
-0.6
nitrogen source
Ammonium Nitrate (N)
+0.3
+0.4
N.D.
-0.1
-0.5
nitrogen source
L-Serine (N)
+0.3
+1.3
N.D.
-0.1
-1.2
nitrogen source
L-Phenylalanine (N)
+0.2
+0.6
N.D.
-0.0
-0.5
nitrogen source
Ethanolamine (N)
+0.6
+0.7
N.D.
-0.1
-0.5
nitrogen source
Ethanolamine (N)
+2.0
+2.3
N.D.
+0.1
-1.2
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