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Cofit
Fitness for 5 genes in
Acinetobacter radioresistens SK82
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX26_00740 and MPMX26_00741 are separated by 80 nucleotides
MPMX26_00741 and MPMX26_00742 are separated by 159 nucleotides
MPMX26_00742 and MPMX26_00743 are separated by 112 nucleotides
MPMX26_00743 and MPMX26_00744 overlap by 8 nucleotides
MPMX26_00740: MPMX26_00740 - tRNA-Met, at 778,067 to 778,143
_00740
MPMX26_00741: MPMX26_00741 - hypothetical protein, at 778,224 to 778,628
_00741
MPMX26_00742: MPMX26_00742 - tRNA-Met, at 778,788 to 778,864
_00742
MPMX26_00743: MPMX26_00743 - hypothetical protein, at 778,977 to 780,014
_00743
MPMX26_00744: MPMX26_00744 - Glutamine-dependent NAD(+) synthetase, at 780,007 to 781,632
_00744
Group
Condition
MPMX26
_00740
MPMX26
_00741
MPMX26
_00742
MPMX26
_00743
MPMX26
_00744
nitrogen source
Ethanolamine (N)
+0.2
N.D.
-4.0
-0.2
N.D.
stress
TSB with Dermcidin 1 ug/mL
-0.3
N.D.
-2.1
+0.3
N.D.
carbon source
L-Glutamine (C)
-1.0
N.D.
-1.3
+0.2
N.D.
carbon source
L-Proline (C)
-0.6
N.D.
-1.4
+0.1
N.D.
stress
TSB with Dermcidin 2 ug/mL
+0.0
N.D.
-1.9
+0.1
N.D.
uv
UV exposure at 150J/m2 for 20 seconds
-0.4
N.D.
-1.2
-0.1
N.D.
no stress control
no stress control
+0.1
N.D.
-1.6
+0.1
N.D.
stress
TSB with Dermcidin 1 ug/mL
-0.0
N.D.
-1.6
+0.3
N.D.
stress
TSB with Dermcidin 2 ug/mL
-0.0
N.D.
-1.4
+0.1
N.D.
nitrogen source
L-Aspartic Acid (N)
-0.3
N.D.
-0.8
-0.2
N.D.
carbon source
L-Proline (C)
-0.2
N.D.
-1.0
-0.0
N.D.
stress
TSB with Dermcidin 2 ug/mL
+0.0
N.D.
-1.6
+0.3
N.D.
uv
UV exposure at 150J/m2 for 20 seconds
-0.1
N.D.
-1.1
-0.0
N.D.
carbon source
L-tyrosine (C)
-0.2
N.D.
-0.9
+0.0
N.D.
uv
UV exposure at 150J/m2 for 20 seconds
+0.1
N.D.
-1.4
+0.1
N.D.
stress
TSB with Dermcidin 1 ug/mL
+0.0
N.D.
-1.1
+0.0
N.D.
nitrogen source
casaminos (N)
-0.1
N.D.
-0.9
+0.0
N.D.
uv
UV exposure at 150J/m2 for 10 seconds
+0.0
N.D.
-1.0
-0.0
N.D.
no stress control
no stress control
+0.2
N.D.
-1.4
+0.2
N.D.
nitrogen source
L-Aspartic Acid (N)
-0.6
N.D.
-0.2
-0.0
N.D.
uv
UV exposure at 150J/m2 for 10 seconds
+0.1
N.D.
-1.0
+0.0
N.D.
tsb
TSB
+0.0
N.D.
-0.8
-0.0
N.D.
no uv control
no UV control
-0.0
N.D.
-0.8
+0.1
N.D.
no uv control
no UV control
+0.0
N.D.
-0.9
+0.2
N.D.
no uv control
no UV control
+0.2
N.D.
-0.8
+0.0
N.D.
tsb
TSB
+0.1
N.D.
-0.6
+0.1
N.D.
uv
UV exposure at 150J/m2 for 10 seconds
+0.2
N.D.
-0.8
+0.2
N.D.
nitrogen source
L-Alanine (N)
-0.2
N.D.
+0.5
+0.1
N.D.
nitrogen source
L-Serine (N)
+0.7
N.D.
+2.1
+0.0
N.D.
nitrogen source
L-Serine (N)
+1.1
N.D.
+2.3
-0.0
N.D.
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