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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06975 and MPMX19_06976 are separated by 102 nucleotides
MPMX19_06976 and MPMX19_06977 are separated by 80 nucleotides
MPMX19_06977 and MPMX19_06978 are separated by 508 nucleotides
MPMX19_06978 and MPMX19_06979 are separated by 118 nucleotides
MPMX19_06975: MPMX19_06975 - HTH-type transcriptional regulator HdfR, at 252,490 to 253,449
_06975
MPMX19_06976: MPMX19_06976 - (2S)-methylsuccinyl-CoA dehydrogenase, at 253,552 to 255,255
_06976
MPMX19_06977: MPMX19_06977 - 2-oxoglutarate dehydrogenase E1 component, at 255,336 to 258,035
_06977
MPMX19_06978: MPMX19_06978 - Alpha-keto acid-binding periplasmic protein TakP, at 258,544 to 259,629
_06978
MPMX19_06979: MPMX19_06979 - hypothetical protein, at 259,748 to 260,395
_06979
Group
Condition
MPMX19
_06975
MPMX19
_06976
MPMX19
_06977
MPMX19
_06978
MPMX19
_06979
mgl
MGL
+0.5
-0.9
-0.1
+0.1
-0.8
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.3
-0.0
-0.0
-0.8
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.7
+0.1
+0.1
-0.0
nl-ccm
NL-CCM, start OD=0.1
-0.1
-0.4
-0.0
+0.1
-0.4
nl-ccm
NL-CCM, start OD=0.3
-0.0
-0.2
+0.2
+0.1
-0.7
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
-0.2
+0.1
-0.0
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
-0.3
-0.1
+0.0
+0.4
mgl
MGL
-0.4
-0.7
-0.3
+0.2
+1.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
-0.4
+0.0
-0.1
+0.6
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.4
+0.0
-0.0
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.4
+0.1
+0.2
+0.3
nl-ccm_agar
NL-CCM_agar
-0.2
-0.1
+0.2
-0.1
+0.5
nf
NF
+0.4
-0.2
-0.1
-0.1
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
-0.5
-0.1
-0.0
+0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-0.3
+0.0
+0.0
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.2
+0.1
+0.1
+0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.3
+0.2
+0.1
+0.7
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.2
+0.0
+0.1
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
-0.2
+0.1
+0.1
+0.2
nf
NF
+0.1
-0.2
-0.0
+0.1
+0.6
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
-0.3
+0.0
-0.1
+0.7
nln
NLN
+0.3
-0.1
+0.1
+0.0
+0.6
nf
NF
+0.3
-0.2
+0.1
+0.3
+0.5
mgl
MGL
-0.2
+0.3
+0.0
+0.4
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.2
+0.2
+0.1
+0.7
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.2
+0.2
+0.0
+0.7
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.5
+0.1
+0.0
-0.0
+0.4
mgl
MGL
+0.9
+0.1
-0.2
-0.1
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
+0.7
-0.1
+0.1
+0.0
nf_with_fulln
NF_with_fullN
+0.4
-0.0
+0.2
+0.1
+0.6
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