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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06939 and MPMX19_06940 are separated by 4 nucleotides
MPMX19_06940 and MPMX19_06941 are separated by 206 nucleotides
MPMX19_06941 and MPMX19_06942 overlap by 4 nucleotides
MPMX19_06942 and MPMX19_06943 are separated by 86 nucleotides
MPMX19_06939: MPMX19_06939 - S-(hydroxymethyl)glutathione dehydrogenase, at 211,759 to 212,889
_06939
MPMX19_06940: MPMX19_06940 - Ectoine dioxygenase, at 212,894 to 213,730
_06940
MPMX19_06941: MPMX19_06941 - putative acyl-CoA dehydrogenase fadE25, at 213,937 to 215,103
_06941
MPMX19_06942: MPMX19_06942 - Long-chain-fatty-acid--CoA ligase, at 215,100 to 216,626
_06942
MPMX19_06943: MPMX19_06943 - Alpha-ketoglutaric semialdehyde dehydrogenase 1, at 216,713 to 218,158
_06943
Group
Condition
MPMX19
_06939
MPMX19
_06940
MPMX19
_06941
MPMX19
_06942
MPMX19
_06943
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.2
-0.0
-0.1
-0.2
nl-ccm
NL-CCM, start OD=0.3
-0.0
-0.2
-0.3
+0.2
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.3
-0.1
-0.2
+0.1
mgl
MGL
-0.2
+0.0
-0.3
-0.2
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
+0.1
-0.0
-0.0
-0.2
mgl
MGL
-0.3
-0.1
+0.3
-0.4
+0.1
nf_with_fulln
NF_with_fullN
-0.0
-0.2
-0.2
+0.1
+0.0
nf_with_fulln
NF_with_fullN
+0.1
+0.1
-0.2
-0.1
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.1
-0.3
-0.0
+0.2
nln
NLN
-0.1
+0.1
-0.3
-0.1
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.2
+0.1
+0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.0
-0.4
+0.1
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.1
-0.1
+0.1
-0.1
nf_with_fulln
NF_with_fullN
-0.0
-0.1
-0.3
+0.2
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.2
-0.1
+0.2
-0.2
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.1
-0.3
+0.2
+0.1
nf_with_fulln
NF_with_fullN
+0.1
-0.2
-0.4
+0.4
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.1
+0.0
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.0
-0.3
+0.2
+0.1
nln
NLN
+0.0
-0.0
-0.1
-0.1
+0.3
nl-ccm
NL-CCM, start OD=0.1
+0.0
-0.2
+0.2
-0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.1
-0.1
-0.0
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
-0.1
-0.1
+0.2
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.1
+0.1
+0.3
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
+0.0
+0.1
+0.2
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.1
+0.0
+0.1
+0.2
nl-ccm
NL-CCM, start OD=0.1
-0.1
-0.1
+0.1
+0.4
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.1
+0.1
+0.2
+0.2
mgl
MGL
-0.1
+0.1
-0.0
+0.1
+0.3
mgl
MGL
-0.1
+0.2
+0.3
-0.4
+0.4
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