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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06905 and MPMX19_06906 are separated by 101 nucleotides
MPMX19_06906 and MPMX19_06907 are separated by 58 nucleotides
MPMX19_06907 and MPMX19_06908 are separated by 359 nucleotides
MPMX19_06908 and MPMX19_06909 are separated by 145 nucleotides
MPMX19_06905: MPMX19_06905 - Transcriptional repressor IclR, at 179,881 to 180,717
_06905
MPMX19_06906: MPMX19_06906 - Acetyl-CoA:oxalate CoA-transferase, at 180,819 to 182,033
_06906
MPMX19_06907: MPMX19_06907 - L-talarate/galactarate dehydratase, at 182,092 to 183,267
_06907
MPMX19_06908: MPMX19_06908 - Leu/Ile/Val-binding protein, at 183,627 to 184,835
_06908
MPMX19_06909: MPMX19_06909 - High-affinity branched-chain amino acid transport system permease protein LivH, at 184,981 to 185,841
_06909
Group
Condition
MPMX19
_06905
MPMX19
_06906
MPMX19
_06907
MPMX19
_06908
MPMX19
_06909
mgl
MGL
-0.6
+0.1
-0.5
-0.2
+0.1
mgl
MGL
-0.3
+0.0
+0.2
-0.1
-0.8
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.3
-0.6
-0.4
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.0
-0.6
-0.1
-0.4
nl-ccm_agar
NL-CCM_agar
+0.0
+0.1
-1.0
-0.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.2
-0.5
+0.3
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.5
+0.1
-0.2
-0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.2
-1.4
+0.6
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.3
-0.1
-0.7
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
+0.2
-0.6
-0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.1
-0.7
+0.1
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
+0.1
-0.6
+0.1
-0.1
nf_with_fulln
NF_with_fullN
+0.2
-0.1
-0.4
+0.3
-0.3
nf_with_fulln
NF_with_fullN
+0.4
-0.2
-0.6
+0.0
-0.0
nl-ccm_agar
NL-CCM_agar
-0.0
-0.0
-0.5
+0.3
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
-0.0
+0.1
-0.3
+0.2
mgl
MGL
-0.1
-0.1
+0.5
-0.4
-0.1
mgl
MGL
+0.1
+0.2
-0.5
-0.0
+0.0
mgl
MGL
-0.2
-0.0
+0.5
-0.4
-0.0
nln
NLN
+0.1
-0.1
-0.4
+0.2
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
+0.2
-0.3
+0.4
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.3
+0.1
+0.5
-0.1
+0.1
mgl
MGL
-0.0
-0.4
+0.7
+0.2
-0.1
nln
NLN
+0.2
-0.1
+0.3
-0.1
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
+0.1
+0.3
+0.3
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
+0.1
+0.3
+0.1
+0.1
nf
NF
-0.0
+0.1
+0.5
+0.3
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
+0.1
+0.6
+0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
+0.6
+0.2
-0.0
nf
NF
+0.2
-0.0
+0.8
+0.1
+0.1
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