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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06897 and MPMX19_06898 are separated by 43 nucleotides
MPMX19_06898 and MPMX19_06899 overlap by 4 nucleotides
MPMX19_06899 and MPMX19_06900 are separated by 51 nucleotides
MPMX19_06900 and MPMX19_06901 are separated by 174 nucleotides
MPMX19_06897: MPMX19_06897 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 171,899 to 172,384
_06897
MPMX19_06898: MPMX19_06898 - FAD-dependent urate hydroxylase, at 172,428 to 173,885
_06898
MPMX19_06899: MPMX19_06899 - hypothetical protein, at 173,882 to 174,973
_06899
MPMX19_06900: MPMX19_06900 - Nucleoid occlusion protein, at 175,025 to 175,864
_06900
MPMX19_06901: MPMX19_06901 - Alpha-ketoglutaric semialdehyde dehydrogenase, at 176,039 to 177,466
_06901
Group
Condition
MPMX19
_06897
MPMX19
_06898
MPMX19
_06899
MPMX19
_06900
MPMX19
_06901
nf_with_fulln
NF_with_fullN
-0.5
+0.1
-0.1
N.D.
-0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.9
+0.1
-0.1
N.D.
+0.1
mgl
MGL
-0.3
+0.1
-0.7
N.D.
+0.3
mgl
MGL
-0.4
-0.0
-0.4
N.D.
+0.4
nf_with_fulln
NF_with_fullN
+0.4
-0.0
-0.3
N.D.
-0.3
mgl
MGL
+0.5
-0.1
-0.3
N.D.
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
+0.2
-0.3
N.D.
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
+0.3
-0.0
N.D.
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
+0.3
-0.3
N.D.
+0.3
nl-ccm_agar
NL-CCM_agar
-0.2
+0.2
-0.2
N.D.
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
+0.2
+0.0
N.D.
+0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.4
+0.0
-0.4
N.D.
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.2
-0.7
N.D.
+0.5
nf_with_fulln
NF_with_fullN
+0.4
-0.0
+0.3
N.D.
-0.4
mgl
MGL
-0.2
+0.5
-0.2
N.D.
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-0.1
-0.1
N.D.
+0.3
nln
NLN
+0.3
+0.2
-0.2
N.D.
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
+0.1
-0.2
N.D.
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
+0.2
-0.2
N.D.
+0.3
nl-ccm_agar
NL-CCM_agar
+0.0
+0.4
-0.2
N.D.
+0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
+0.2
-0.1
N.D.
+0.3
nf_with_fulln
NF_with_fullN
+0.5
+0.3
+0.1
N.D.
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.5
+0.1
+0.0
N.D.
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.4
+0.1
-0.1
N.D.
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.3
+0.2
N.D.
+0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.4
+0.0
N.D.
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.4
+0.4
-0.1
N.D.
+0.3
mgl
MGL
-0.1
+0.6
-0.0
N.D.
+0.6
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.6
+0.3
-0.2
N.D.
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.6
+0.2
+0.1
N.D.
+0.2
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