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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06859 and MPMX19_06860 overlap by 4 nucleotides
MPMX19_06860 and MPMX19_06861 overlap by 4 nucleotides
MPMX19_06861 and MPMX19_06862 are separated by 11 nucleotides
MPMX19_06862 and MPMX19_06863 overlap by 4 nucleotides
MPMX19_06859: MPMX19_06859 - Acetophenone carboxylase delta subunit, at 129,213 to 131,201
_06859
MPMX19_06860: MPMX19_06860 - hypothetical protein, at 131,198 to 131,506
_06860
MPMX19_06861: MPMX19_06861 - Hydrogen cyanide synthase subunit HcnB, at 131,503 to 132,888
_06861
MPMX19_06862: MPMX19_06862 - hypothetical protein, at 132,900 to 133,406
_06862
MPMX19_06863: MPMX19_06863 - hypothetical protein, at 133,403 to 133,882
_06863
Group
Condition
MPMX19
_06859
MPMX19
_06860
MPMX19
_06861
MPMX19
_06862
MPMX19
_06863
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
N.D.
+0.0
-1.3
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
N.D.
+0.0
-1.2
-0.2
mgl
MGL
-0.1
N.D.
-0.3
-0.4
-0.6
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
N.D.
-0.2
-0.3
-0.9
mgl
MGL
+0.1
N.D.
-0.3
-1.2
+0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
N.D.
-0.1
-0.5
-0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
N.D.
-0.0
-0.8
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
N.D.
-0.1
-0.6
-0.4
nl-ccm_agar
NL-CCM_agar
-0.1
N.D.
+0.1
-0.5
-0.5
mgl
MGL
+0.3
N.D.
-0.4
-0.3
-0.5
nln
NLN
+0.0
N.D.
-0.1
-0.4
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
N.D.
+0.2
-0.5
-0.6
mgl
MGL
+0.0
N.D.
-0.1
-1.0
+0.2
nln
NLN
+0.0
N.D.
+0.1
-0.4
-0.6
nf
NF
+0.1
N.D.
-0.3
-0.9
+0.2
nf_with_fulln
NF_with_fullN
+0.1
N.D.
-0.1
-0.3
-0.6
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
N.D.
+0.1
-1.1
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
N.D.
+0.1
-0.5
-0.2
nf
NF
+0.0
N.D.
+0.0
-0.7
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
N.D.
+0.0
+0.2
-0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
N.D.
+0.3
-0.2
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
N.D.
+0.4
-0.2
-0.4
nln
NLN
+0.2
N.D.
+0.1
-0.2
-0.4
nl-ccm
NL-CCM, start OD=0.1
+0.1
N.D.
-0.0
+0.4
-0.8
nln
NLN
+0.0
N.D.
+0.1
+0.3
-0.7
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
N.D.
+0.4
-0.7
-0.1
nl-ccm
NL-CCM, start OD=0.3
+0.2
N.D.
+0.2
-0.1
-0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
N.D.
-0.1
+0.6
-0.3
nl-ccm
NL-CCM, start OD=0.3
+0.1
N.D.
+0.1
+0.6
-0.3
nf_with_fulln
NF_with_fullN
+0.1
N.D.
+0.3
+0.3
-0.2
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