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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06797 and MPMX19_06798 are separated by 17 nucleotides
MPMX19_06798 and MPMX19_06799 are separated by 59 nucleotides
MPMX19_06799 and MPMX19_06800 overlap by 4 nucleotides
MPMX19_06800 and MPMX19_06801 are separated by 4 nucleotides
MPMX19_06797: MPMX19_06797 - 5-carboxymethyl-2-hydroxymuconate Delta-isomerase, at 62,899 to 63,288
_06797
MPMX19_06798: MPMX19_06798 - 3,4-dihydroxyphenylacetate 2,3-dioxygenase, at 63,306 to 64,154
_06798
MPMX19_06799: MPMX19_06799 - Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase, at 64,214 to 64,954
_06799
MPMX19_06800: MPMX19_06800 - Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase, at 64,951 to 65,619
_06800
MPMX19_06801: MPMX19_06801 - C4-dicarboxylate TRAP transporter large permease protein DctM, at 65,624 to 66,955
_06801
Group
Condition
MPMX19
_06797
MPMX19
_06798
MPMX19
_06799
MPMX19
_06800
MPMX19
_06801
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.0
-0.2
-1.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.1
-0.1
-1.0
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.1
-0.1
-0.8
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.1
+0.1
-0.7
-0.1
nln
NLN
N.D.
-0.0
-0.1
-0.7
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.1
+0.0
-0.5
-0.1
nl-ccm_agar
NL-CCM_agar
N.D.
+0.1
+0.1
-0.7
-0.2
mgl
MGL
N.D.
+0.2
-0.1
-0.5
-0.2
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.2
-0.2
-0.2
-0.0
nf
NF
N.D.
+0.2
-0.1
-0.5
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.0
+0.2
-0.4
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.2
+0.2
-0.4
-0.0
nf_with_fulln
NF_with_fullN
N.D.
+0.0
+0.2
-0.7
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.2
-0.1
-0.5
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.1
+0.2
-0.4
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
+0.2
-0.0
-0.5
+0.0
mgl
MGL
N.D.
+0.1
+0.5
-0.8
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.3
+0.2
-0.6
+0.0
nf_with_fulln
NF_with_fullN
N.D.
-0.1
+0.3
-0.5
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.2
+0.3
-0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.1
+0.2
-0.3
-0.1
mgl
MGL
N.D.
+0.3
+0.3
-0.0
-0.7
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.1
+0.1
-0.6
+0.3
nf_with_fulln
NF_with_fullN
N.D.
+0.0
+0.2
-0.4
+0.2
nf_with_fulln
NF_with_fullN
N.D.
+0.0
+0.3
-0.4
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.0
-0.0
+0.3
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.5
+0.4
+0.4
-0.2
mgl
MGL
N.D.
+0.1
-0.3
+0.3
+0.1
nf_with_fulln
NF_with_fullN
N.D.
+0.1
+0.2
-0.2
+0.1
mgl
MGL
N.D.
+0.2
+0.3
+0.1
+0.2
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