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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06785 and MPMX19_06786 are separated by 720 nucleotides
MPMX19_06786 and MPMX19_06787 are separated by 183 nucleotides
MPMX19_06787 and MPMX19_06788 are separated by 108 nucleotides
MPMX19_06788 and MPMX19_06789 are separated by 40 nucleotides
MPMX19_06785: MPMX19_06785 - L-idonate 5-dehydrogenase (NAD(P)(+)), at 48,831 to 49,868
_06785
MPMX19_06786: MPMX19_06786 - Formate dehydrogenase, mitochondrial, at 50,589 to 51,629
_06786
MPMX19_06787: MPMX19_06787 - Fosfomycin resistance protein AbaF, at 51,813 to 53,213
_06787
MPMX19_06788: MPMX19_06788 - putative protein YiaX1, at 53,322 to 54,305
_06788
MPMX19_06789: MPMX19_06789 - Octopine catabolism/uptake operon regulatory protein OccR, at 54,346 to 55,242
_06789
Group
Condition
MPMX19
_06785
MPMX19
_06786
MPMX19
_06787
MPMX19
_06788
MPMX19
_06789
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.4
-0.5
+0.1
-0.6
-0.8
nln
NLN
-1.0
-0.5
-0.1
+0.2
-0.8
mgl
MGL
-1.2
-0.7
+0.2
+0.3
-0.6
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.5
-0.0
-0.2
-0.9
mgl
MGL
-1.2
+0.2
+0.0
-0.7
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.8
+0.1
-0.4
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
-0.4
+0.0
-0.2
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.2
-0.5
-0.1
-0.7
mgl
MGL
-0.6
-0.9
+0.2
+0.5
-0.7
nf
NF
+0.2
-0.4
-0.2
-0.9
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-1.0
-0.5
-0.2
-0.1
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-0.8
+0.2
-0.5
-0.7
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
-0.5
-0.1
+0.4
-0.8
nln
NLN
-0.1
-0.7
-0.1
-0.3
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-1.1
+0.3
+0.1
+0.2
-0.4
nl-ccm
NL-CCM, start OD=0.3
+0.7
+0.0
-0.2
-0.4
-1.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
-0.3
-0.2
-0.5
+0.3
mgl
MGL
-1.3
+0.4
+0.2
-0.5
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.8
-0.2
+0.0
+0.2
+0.2
nln
NLN
-0.2
-0.2
-0.0
+0.4
-0.6
nf_with_fulln
NF_with_fullN
+0.7
-0.4
+0.1
+0.0
-1.0
mgl
MGL
-0.2
-0.5
-0.0
+0.5
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.6
-0.2
-0.1
+0.4
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
-0.5
-0.1
+0.3
+0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.5
-0.6
-0.1
-0.5
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+1.3
-0.6
+0.1
-0.1
-0.6
mgl
MGL
-0.5
+0.0
+0.4
-0.2
+0.4
nl-ccm
NL-CCM, start OD=0.3
+0.8
-0.3
+0.0
-0.5
+0.2
nf
NF
+0.7
-0.5
-0.2
-0.1
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.8
+0.1
+0.3
+0.6
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