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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06776 and MPMX19_06777 are separated by 210 nucleotides
MPMX19_06777 and MPMX19_06778 are separated by 16 nucleotides
MPMX19_06778 and MPMX19_06779 are separated by 136 nucleotides
MPMX19_06779 and MPMX19_06780 are separated by 86 nucleotides
MPMX19_06776: MPMX19_06776 - hypothetical protein, at 41,700 to 42,107
_06776
MPMX19_06777: MPMX19_06777 - hypothetical protein, at 42,318 to 43,022
_06777
MPMX19_06778: MPMX19_06778 - HTH-type transcriptional regulator YhaJ, at 43,039 to 43,968
_06778
MPMX19_06779: MPMX19_06779 - Quercetin 2,3-dioxygenase, at 44,105 to 44,803
_06779
MPMX19_06780: MPMX19_06780 - Potassium channel, at 44,890 to 45,465
_06780
Group
Condition
MPMX19
_06776
MPMX19
_06777
MPMX19
_06778
MPMX19
_06779
MPMX19
_06780
mgl
MGL
+0.3
-1.7
-0.1
-0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-1.4
-0.3
+0.0
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
-1.0
-0.2
-0.0
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.8
-0.6
-0.1
-0.0
mgl
MGL
+0.3
-1.0
-0.3
-0.3
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
-1.3
-0.2
-0.1
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
-1.2
-0.0
-0.1
-0.0
nl-ccm
NL-CCM, start OD=0.1
+0.1
-0.8
-0.0
-0.2
+0.0
nln
NLN
+0.2
-0.8
-0.0
-0.3
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.6
-1.3
+0.0
-0.1
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.5
-0.9
-0.4
+0.0
+0.0
nl-ccm_agar
NL-CCM_agar
+0.3
-0.8
+0.0
+0.1
-0.1
mgl
MGL
-0.2
+0.1
-0.5
-0.2
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
-1.0
+0.3
-0.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
-0.3
+0.4
+0.1
+0.1
nl-ccm_agar
NL-CCM_agar
+0.4
-0.3
+0.3
-0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
+1.0
-0.3
-0.0
+0.3
nln
NLN
-0.0
+0.6
-0.4
-0.2
+0.3
mgl
MGL
+0.4
-0.4
+0.4
+0.1
+0.1
nf_with_fulln
NF_with_fullN
-0.1
+0.8
-0.2
-0.0
+0.1
mgl
MGL
+0.6
-0.2
+0.2
+0.3
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.9
-0.1
+0.2
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.5
+0.2
+0.6
+0.0
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
+1.0
+0.5
-0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
-0.1
+0.4
+0.3
-0.0
nl-ccm
NL-CCM, start OD=0.3
+0.3
+0.5
+0.3
+0.1
-0.0
nln
NLN
+0.4
+0.8
+0.1
+0.0
+0.1
nf_with_fulln
NF_with_fullN
+0.1
+1.2
+0.4
-0.2
+0.1
nf_with_fulln
NF_with_fullN
+0.1
+1.1
+0.0
+0.2
+0.1
nln
NLN
+0.2
+1.2
+0.6
-0.1
+0.1
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