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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06773 and MPMX19_06774 overlap by 4 nucleotides
MPMX19_06774 and MPMX19_06775 are separated by 32 nucleotides
MPMX19_06775 and MPMX19_06776 are separated by 138 nucleotides
MPMX19_06776 and MPMX19_06777 are separated by 210 nucleotides
MPMX19_06773: MPMX19_06773 - 2-(R)-hydroxypropyl-CoM dehydrogenase, at 39,152 to 39,940
_06773
MPMX19_06774: MPMX19_06774 - hypothetical protein, at 39,937 to 40,635
_06774
MPMX19_06775: MPMX19_06775 - Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase, at 40,668 to 41,561
_06775
MPMX19_06776: MPMX19_06776 - hypothetical protein, at 41,700 to 42,107
_06776
MPMX19_06777: MPMX19_06777 - hypothetical protein, at 42,318 to 43,022
_06777
Group
Condition
MPMX19
_06773
MPMX19
_06774
MPMX19
_06775
MPMX19
_06776
MPMX19
_06777
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.2
+0.3
+0.2
-1.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.2
-0.4
-0.5
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
-0.2
-0.1
+0.3
-1.2
mgl
MGL
+0.9
-0.2
-0.2
+0.3
-1.7
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.1
-0.1
+0.6
-1.3
mgl
MGL
-0.0
+0.4
-0.5
+0.3
-1.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.1
-0.3
+0.2
-0.6
mgl
MGL
-0.6
+0.3
-0.3
+0.4
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.5
-0.2
+0.4
-0.2
mgl
MGL
-0.2
+0.4
-0.5
-0.2
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.7
-0.0
-0.2
+0.4
-1.3
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
+0.2
-0.3
+0.5
-0.9
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.5
+0.1
-0.1
-0.1
-0.7
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.3
+0.1
+0.1
-0.8
nl-ccm
NL-CCM, start OD=0.1
+0.3
+0.2
+0.1
+0.1
-0.8
nl-ccm_agar
NL-CCM_agar
+0.3
+0.2
-0.1
+0.3
-0.8
nln
NLN
+0.2
+0.4
+0.0
+0.2
-0.8
nl-ccm
NL-CCM, start OD=0.3
+0.5
-0.3
-0.2
-0.2
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.1
-0.1
-0.6
+1.0
nf_with_fulln
NF_with_fullN
+0.5
+0.2
+0.1
-0.3
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.6
+0.2
-0.0
-0.2
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.5
+0.6
-0.2
-0.2
+0.1
nln
NLN
+0.4
-0.2
+0.2
-0.2
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
+0.1
+0.2
-0.1
+0.9
mgl
MGL
+0.5
+0.3
+0.3
+0.4
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
-0.1
+0.1
-0.5
+1.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.5
+0.1
-0.1
+0.5
+0.3
nln
NLN
+0.3
-0.1
+0.0
+0.2
+1.2
nf_with_fulln
NF_with_fullN
+0.5
+0.1
-0.1
+0.1
+1.2
nf_with_fulln
NF_with_fullN
+0.8
+0.1
+0.5
+0.1
+1.1
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