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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06557 and MPMX19_06558 are separated by 179 nucleotides
MPMX19_06558 and MPMX19_06559 are separated by 143 nucleotides
MPMX19_06559 and MPMX19_06560 overlap by 8 nucleotides
MPMX19_06560 and MPMX19_06561 are separated by 128 nucleotides
MPMX19_06557: MPMX19_06557 - Leukotoxin export protein LtxD, at 26,394 to 27,902
_06557
MPMX19_06558: MPMX19_06558 - hypothetical protein, at 28,082 to 29,560
_06558
MPMX19_06559: MPMX19_06559 - hypothetical protein, at 29,704 to 30,072
_06559
MPMX19_06560: MPMX19_06560 - hypothetical protein, at 30,065 to 30,319
_06560
MPMX19_06561: MPMX19_06561 - hypothetical protein, at 30,448 to 31,500
_06561
Group
Condition
MPMX19
_06557
MPMX19
_06558
MPMX19
_06559
MPMX19
_06560
MPMX19
_06561
mgl
MGL
-0.4
-0.0
N.D.
-0.7
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.1
N.D.
-0.7
-0.1
mgl
MGL
-0.2
-0.1
N.D.
-0.5
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
+0.1
N.D.
-0.6
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.1
N.D.
-0.6
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.0
N.D.
-0.7
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
+0.1
N.D.
-0.8
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
+0.1
N.D.
-0.5
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
+0.0
N.D.
-0.4
-0.1
mgl
MGL
-0.1
-0.4
N.D.
+0.2
-0.2
mgl
MGL
-0.4
-0.1
N.D.
-0.1
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.1
N.D.
-0.4
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
+0.1
N.D.
-0.3
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.3
N.D.
-0.8
-0.0
nln
NLN
-0.1
-0.1
N.D.
-0.3
+0.1
mgl
MGL
-0.1
-0.3
N.D.
+0.2
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.1
N.D.
-0.3
-0.2
mgl
MGL
-0.2
-0.0
N.D.
+0.4
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.2
N.D.
-0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.3
N.D.
-0.4
-0.1
nln
NLN
+0.1
+0.2
N.D.
-0.4
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
+0.3
N.D.
-0.3
-0.1
nf_with_fulln
NF_with_fullN
+0.2
+0.1
N.D.
-0.3
-0.0
nf
NF
+0.2
+0.2
N.D.
-0.4
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.0
N.D.
-0.3
-0.0
nln
NLN
+0.1
+0.2
N.D.
-0.2
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.3
N.D.
-0.5
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.0
N.D.
+0.4
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.1
N.D.
+0.1
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.1
N.D.
+0.4
+0.2
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