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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06479 and MPMX19_06480 are separated by 9 nucleotides
MPMX19_06480 and MPMX19_06481 are separated by 20 nucleotides
MPMX19_06481 and MPMX19_06482 are separated by 15 nucleotides
MPMX19_06482 and MPMX19_06483 are separated by 12 nucleotides
MPMX19_06479: MPMX19_06479 - (R)-phenoxypropionate/alpha-ketoglutarate- dioxygenase, at 262,639 to 263,529
_06479
MPMX19_06480: MPMX19_06480 - hypothetical protein, at 263,539 to 264,573
_06480
MPMX19_06481: MPMX19_06481 - Thiosulfate sulfurtransferase GlpE, at 264,594 to 266,210
_06481
MPMX19_06482: MPMX19_06482 - 3-mercaptopropionate dioxygenase, at 266,226 to 266,864
_06482
MPMX19_06483: MPMX19_06483 - Aliphatic sulfonates import ATP-binding protein SsuB, at 266,877 to 267,671
_06483
Group
Condition
MPMX19
_06479
MPMX19
_06480
MPMX19
_06481
MPMX19
_06482
MPMX19
_06483
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.0
-0.2
-0.6
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.5
-0.1
+0.2
-0.1
mgl
MGL
-0.5
-0.4
+0.1
+0.3
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.1
-0.3
-0.3
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.8
+0.3
+0.3
+0.0
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.0
+0.1
-0.6
+0.2
mgl
MGL
+0.0
+0.1
+0.3
+0.1
-0.6
nl-ccm
NL-CCM, start OD=0.3
-0.5
-0.1
+0.2
+0.1
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.2
+0.5
+0.0
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
+0.2
+0.4
+0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.1
+0.3
+0.4
+0.1
mgl
MGL
-0.0
-0.2
-0.1
+0.5
+0.4
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.0
+0.5
-0.3
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
+0.0
+0.3
+0.2
+0.2
nln
NLN
+0.2
+0.1
-0.2
+0.2
+0.3
nln
NLN
-0.2
+0.2
+0.3
+0.2
+0.2
mgl
MGL
-0.1
-0.1
+0.4
+0.1
+0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
-0.2
+0.3
+0.4
+0.2
nln
NLN
-0.1
+0.1
+0.3
+0.2
+0.2
nln
NLN
+0.1
+0.3
+0.0
+0.1
+0.3
nf
NF
+0.1
-0.0
+0.3
+0.3
+0.2
nf_with_fulln
NF_with_fullN
+0.3
+0.1
+0.4
-0.1
+0.3
nf_with_fulln
NF_with_fullN
+0.2
+0.1
-0.1
+0.2
+0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
+0.0
+0.4
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.3
+0.3
+0.1
+0.0
+0.3
nf_with_fulln
NF_with_fullN
+0.2
+0.1
+0.0
+0.1
+0.6
nf_with_fulln
NF_with_fullN
+0.3
+0.3
+0.5
-0.1
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
+0.0
+0.1
+0.5
+0.4
nf_with_fulln
NF_with_fullN
+0.1
+0.3
+0.2
+0.3
+0.4
nf_with_fulln
NF_with_fullN
+0.2
-0.0
+0.4
+0.2
+0.6
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