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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06477 and MPMX19_06478 overlap by 11 nucleotides
MPMX19_06478 and MPMX19_06479 overlap by 4 nucleotides
MPMX19_06479 and MPMX19_06480 are separated by 9 nucleotides
MPMX19_06480 and MPMX19_06481 are separated by 20 nucleotides
MPMX19_06477: MPMX19_06477 - Putative aliphatic sulfonates-binding protein, at 260,821 to 261,804
_06477
MPMX19_06478: MPMX19_06478 - hypothetical protein, at 261,794 to 262,642
_06478
MPMX19_06479: MPMX19_06479 - (R)-phenoxypropionate/alpha-ketoglutarate- dioxygenase, at 262,639 to 263,529
_06479
MPMX19_06480: MPMX19_06480 - hypothetical protein, at 263,539 to 264,573
_06480
MPMX19_06481: MPMX19_06481 - Thiosulfate sulfurtransferase GlpE, at 264,594 to 266,210
_06481
Group
Condition
MPMX19
_06477
MPMX19
_06478
MPMX19
_06479
MPMX19
_06480
MPMX19
_06481
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.1
-0.2
-0.1
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.2
-0.0
-0.1
-0.3
mgl
MGL
+0.1
+0.4
-0.5
-0.4
+0.1
mgl
MGL
-0.3
-0.0
-0.1
-0.1
+0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.3
-0.0
-0.3
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.3
-0.8
+0.3
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
+0.1
-0.2
-0.2
+0.5
nl-ccm
NL-CCM, start OD=0.3
+0.3
+0.5
-0.5
-0.1
+0.2
nln
NLN
+0.2
+0.1
-0.2
-0.1
+0.3
nf
NF
+0.2
-0.3
+0.1
-0.0
+0.3
mgl
MGL
-0.2
+0.3
+0.0
+0.1
+0.3
nl-ccm_agar
NL-CCM_agar
-0.0
+0.4
+0.1
+0.2
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.2
-0.3
+0.2
+0.4
nln
NLN
+0.0
+0.4
-0.2
+0.2
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
+0.5
-0.1
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
+0.4
-0.2
+0.1
+0.4
nf_with_fulln
NF_with_fullN
+0.2
-0.4
+0.3
+0.3
+0.5
nf_with_fulln
NF_with_fullN
+0.2
+0.3
+0.2
+0.1
+0.0
nln
NLN
+0.2
+0.2
+0.1
+0.3
+0.0
nl-ccm_agar
NL-CCM_agar
+0.0
+0.5
+0.3
-0.1
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.2
+0.1
+0.1
-0.0
+0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.3
+0.2
+0.2
+0.2
nln
NLN
+0.2
+0.4
-0.1
+0.1
+0.3
nf_with_fulln
NF_with_fullN
+0.4
+0.0
+0.2
-0.0
+0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
+0.5
+0.0
+0.1
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.4
+0.3
+0.0
+0.4
nf_with_fulln
NF_with_fullN
+0.2
+0.2
+0.3
+0.1
+0.4
mgl
MGL
+0.0
+0.8
+0.1
-0.0
+0.4
nf_with_fulln
NF_with_fullN
+0.3
+0.4
+0.1
+0.3
+0.2
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.6
+0.3
+0.3
+0.1
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