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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06474 and MPMX19_06475 are separated by 6 nucleotides
MPMX19_06475 and MPMX19_06476 are separated by 128 nucleotides
MPMX19_06476 and MPMX19_06477 are separated by 30 nucleotides
MPMX19_06477 and MPMX19_06478 overlap by 11 nucleotides
MPMX19_06474: MPMX19_06474 - Vitamin B12 import ATP-binding protein BtuD, at 258,047 to 258,910
_06474
MPMX19_06475: MPMX19_06475 - Putative aliphatic sulfonates transport permease protein SsuC, at 258,917 to 259,744
_06475
MPMX19_06476: MPMX19_06476 - HTH-type transcriptional regulator ArgP, at 259,873 to 260,790
_06476
MPMX19_06477: MPMX19_06477 - Putative aliphatic sulfonates-binding protein, at 260,821 to 261,804
_06477
MPMX19_06478: MPMX19_06478 - hypothetical protein, at 261,794 to 262,642
_06478
Group
Condition
MPMX19
_06474
MPMX19
_06475
MPMX19
_06476
MPMX19
_06477
MPMX19
_06478
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.1
-0.3
-0.4
-0.1
mgl
MGL
N.D.
-0.3
+0.1
-0.3
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.8
-0.1
-0.0
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.4
-0.4
+0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.7
+0.2
+0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.1
+0.2
+0.1
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.6
+0.1
+0.0
+0.4
nf
NF
N.D.
-0.3
+0.3
+0.2
-0.3
nln
NLN
N.D.
-0.2
+0.2
+0.1
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.4
+0.4
+0.0
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.4
+0.3
+0.1
+0.0
nf_with_fulln
NF_with_fullN
N.D.
+0.0
+0.2
+0.2
-0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.4
+0.2
+0.1
+0.3
nln
NLN
N.D.
-0.3
+0.1
+0.0
+0.4
nln
NLN
N.D.
-0.4
+0.1
+0.2
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.2
+0.1
+0.1
+0.2
nln
NLN
N.D.
-0.2
+0.2
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.5
+0.1
+0.3
+0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.3
+0.1
+0.0
+0.5
mgl
MGL
N.D.
+0.2
+0.2
-0.2
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.3
+0.2
+0.2
+0.5
mgl
MGL
N.D.
-0.4
+0.0
+0.0
+0.8
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.2
+0.4
+0.1
-0.1
nl-ccm
NL-CCM, start OD=0.1
N.D.
-0.0
-0.1
+0.1
+0.6
nf_with_fulln
NF_with_fullN
N.D.
+0.0
+0.2
+0.2
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.4
+0.3
+0.1
-0.0
nl-ccm_agar
NL-CCM_agar
N.D.
-0.1
+0.4
+0.0
+0.5
nf_with_fulln
NF_with_fullN
N.D.
-0.0
+0.2
+0.3
+0.4
nl-ccm_agar
NL-CCM_agar
N.D.
+0.3
+0.3
-0.0
+0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.0
+0.4
+0.2
+0.4
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