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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06405 and MPMX19_06406 are separated by 148 nucleotides
MPMX19_06406 and MPMX19_06407 overlap by 11 nucleotides
MPMX19_06407 and MPMX19_06408 are separated by 19 nucleotides
MPMX19_06408 and MPMX19_06409 overlap by 4 nucleotides
MPMX19_06405: MPMX19_06405 - hypothetical protein, at 171,051 to 171,518
_06405
MPMX19_06406: MPMX19_06406 - hypothetical protein, at 171,667 to 172,011
_06406
MPMX19_06407: MPMX19_06407 - Cation efflux system protein CusA, at 172,001 to 175,189
_06407
MPMX19_06408: MPMX19_06408 - Cation efflux system protein CusB, at 175,209 to 176,606
_06408
MPMX19_06409: MPMX19_06409 - hypothetical protein, at 176,603 to 177,874
_06409
Group
Condition
MPMX19
_06405
MPMX19
_06406
MPMX19
_06407
MPMX19
_06408
MPMX19
_06409
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
N.D.
-0.2
-0.1
-0.7
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
N.D.
+0.1
-0.1
-0.5
nf_with_fulln
NF_with_fullN
+0.1
N.D.
-0.2
-0.3
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
N.D.
-0.0
-0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
N.D.
-0.2
-0.3
+0.1
mgl
MGL
-0.3
N.D.
+0.1
-0.3
-0.1
nln
NLN
-0.2
N.D.
-0.1
-0.1
-0.1
nf_with_fulln
NF_with_fullN
+0.2
N.D.
-0.1
-0.2
-0.3
nf_with_fulln
NF_with_fullN
-0.0
N.D.
-0.1
-0.2
-0.1
mgl
MGL
-0.3
N.D.
-0.1
+0.1
-0.1
mgl
MGL
-0.1
N.D.
-0.0
+0.2
-0.3
nln
NLN
+0.3
N.D.
-0.1
-0.1
-0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
N.D.
-0.0
-0.2
-0.1
nln
NLN
+0.2
N.D.
-0.1
-0.2
+0.0
nf_with_fulln
NF_with_fullN
+0.2
N.D.
-0.1
-0.1
-0.1
nf
NF
+0.2
N.D.
+0.1
-0.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
N.D.
-0.1
-0.1
+0.0
nf_with_fulln
NF_with_fullN
+0.2
N.D.
+0.0
-0.1
-0.1
nl-ccm
NL-CCM, start OD=0.3
+0.3
N.D.
-0.0
+0.1
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
N.D.
-0.0
-0.2
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
N.D.
+0.0
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
N.D.
+0.1
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.4
N.D.
-0.1
-0.1
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
N.D.
-0.0
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
N.D.
+0.0
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
N.D.
+0.0
+0.0
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.5
N.D.
+0.0
-0.1
+0.0
mgl
MGL
+0.3
N.D.
+0.0
-0.1
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
N.D.
-0.0
-0.2
+0.3
nl-ccm
NL-CCM, start OD=0.3
+0.5
N.D.
-0.1
+0.0
+0.1
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