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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06329 and MPMX19_06330 overlap by 4 nucleotides
MPMX19_06330 and MPMX19_06331 are separated by 757 nucleotides
MPMX19_06331 and MPMX19_06332 overlap by 4 nucleotides
MPMX19_06332 and MPMX19_06333 overlap by 14 nucleotides
MPMX19_06329: MPMX19_06329 - hypothetical protein, at 94,794 to 95,720
_06329
MPMX19_06330: MPMX19_06330 - hypothetical protein, at 95,717 to 97,420
_06330
MPMX19_06331: MPMX19_06331 - hypothetical protein, at 98,178 to 99,077
_06331
MPMX19_06332: MPMX19_06332 - hypothetical protein, at 99,074 to 100,543
_06332
MPMX19_06333: MPMX19_06333 - Regulatory protein AtoC, at 100,530 to 101,867
_06333
Group
Condition
MPMX19
_06329
MPMX19
_06330
MPMX19
_06331
MPMX19
_06332
MPMX19
_06333
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.3
-0.1
-0.7
-0.4
nf_with_fulln
NF_with_fullN
-0.1
-0.3
-0.4
-0.4
-0.1
nf_with_fulln
NF_with_fullN
-0.9
-0.2
-0.0
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.5
+0.2
-0.2
-0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.3
-0.2
-0.2
-0.1
nln
NLN
-0.2
-0.3
+0.0
-0.4
-0.1
nf_with_fulln
NF_with_fullN
-0.4
-0.3
-0.1
-0.2
+0.1
nl-ccm_agar
NL-CCM_agar
-0.1
-0.1
+0.0
-0.2
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.2
-0.2
-0.5
-0.4
nln
NLN
-0.1
-0.3
-0.0
-0.4
+0.1
nf_with_fulln
NF_with_fullN
-0.5
-0.2
-0.0
-0.1
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.2
+0.1
-0.5
+0.1
mgl
MGL
+0.1
-0.3
+0.0
-0.4
+0.1
mgl
MGL
-0.3
-0.1
+0.2
-0.6
+0.2
nl-ccm_agar
NL-CCM_agar
+0.2
-0.2
-0.0
-0.6
+0.1
mgl
MGL
-0.5
-0.1
-0.0
-0.3
+0.4
nf
NF
-0.4
-0.3
-0.0
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.1
-0.2
-0.3
+0.0
+0.3
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.2
+0.1
+0.1
-0.4
nln
NLN
-0.4
-0.1
+0.1
-0.1
+0.2
nf_with_fulln
NF_with_fullN
-0.8
-0.1
-0.0
+0.4
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.1
-0.1
-0.4
+0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
-0.2
-0.1
-0.4
+0.2
mgl
MGL
+0.0
+0.0
-0.1
-0.4
+0.5
mgl
MGL
+0.4
-0.1
+0.1
+0.1
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.2
-0.2
-0.2
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.2
+0.1
+0.4
-0.1
nl-ccm
NL-CCM, start OD=0.3
-0.1
-0.2
+0.3
+0.4
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.0
+0.2
-0.2
+0.5
mgl
MGL
+0.1
+0.2
+0.2
-0.2
+0.5
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