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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06225 and MPMX19_06226 overlap by 4 nucleotides
MPMX19_06226 and MPMX19_06227 are separated by 48 nucleotides
MPMX19_06227 and MPMX19_06228 are separated by 42 nucleotides
MPMX19_06228 and MPMX19_06229 are separated by 93 nucleotides
MPMX19_06225: MPMX19_06225 - Xylose import ATP-binding protein XylG, at 410,294 to 411,889
_06225
MPMX19_06226: MPMX19_06226 - Xylose transport system permease protein XylH, at 411,886 to 413,085
_06226
MPMX19_06227: MPMX19_06227 - L-arabinose 1-dehydrogenase (NAD(P)(+)), at 413,134 to 414,072
_06227
MPMX19_06228: MPMX19_06228 - hypothetical protein, at 414,115 to 415,695
_06228
MPMX19_06229: MPMX19_06229 - L-arabonate dehydratase, at 415,789 to 417,627
_06229
Group
Condition
MPMX19
_06225
MPMX19
_06226
MPMX19
_06227
MPMX19
_06228
MPMX19
_06229
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.2
-0.7
N.D.
-0.0
mgl
MGL
-0.0
+0.0
-0.5
N.D.
-0.2
nln
NLN
+0.0
-0.0
-0.5
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.0
-0.2
N.D.
-0.2
nln
NLN
+0.0
-0.0
-0.3
N.D.
-0.3
nl-ccm
NL-CCM, start OD=0.3
-0.1
-0.0
-0.4
N.D.
-0.1
nf_with_fulln
NF_with_fullN
-0.2
-0.1
-0.1
N.D.
-0.2
nl-ccm
NL-CCM, start OD=0.3
-0.3
+0.1
-0.2
N.D.
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.1
-0.7
N.D.
+0.2
nf_with_fulln
NF_with_fullN
-0.1
-0.1
-0.2
N.D.
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
+0.0
+0.1
N.D.
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.3
-0.8
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.0
+0.2
N.D.
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
+0.0
+0.3
N.D.
+0.0
mgl
MGL
+0.3
+0.3
-0.6
N.D.
+0.0
nf
NF
-0.2
+0.0
+0.3
N.D.
-0.0
nln
NLN
-0.1
+0.1
+0.2
N.D.
-0.1
nl-ccm_agar
NL-CCM_agar
+0.0
-0.1
+0.3
N.D.
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.0
+0.3
N.D.
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.0
+0.4
N.D.
-0.1
nln
NLN
-0.2
+0.1
+0.3
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.0
+0.3
N.D.
-0.1
nln
NLN
-0.1
+0.2
+0.1
N.D.
+0.1
mgl
MGL
-0.0
+0.1
+0.7
N.D.
-0.2
nln
NLN
-0.0
+0.2
+0.5
N.D.
-0.1
nl-ccm_agar
NL-CCM_agar
+0.0
+0.0
+0.4
N.D.
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
+0.0
+0.5
N.D.
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
+0.2
+0.3
N.D.
+0.1
nf_with_fulln
NF_with_fullN
+0.1
-0.1
+0.3
N.D.
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.1
+0.3
N.D.
+0.2
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