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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06216 and MPMX19_06217 overlap by 4 nucleotides
MPMX19_06217 and MPMX19_06218 are separated by 91 nucleotides
MPMX19_06218 and MPMX19_06219 are separated by 457 nucleotides
MPMX19_06219 and MPMX19_06220 are separated by 196 nucleotides
MPMX19_06216: MPMX19_06216 - Inner membrane ABC transporter permease protein YtfT, at 398,784 to 399,827
_06216
MPMX19_06217: MPMX19_06217 - Fructose import ATP-binding protein FruK, at 399,824 to 401,383
_06217
MPMX19_06218: MPMX19_06218 - ABC transporter periplasmic-binding protein YtfQ, at 401,475 to 402,443
_06218
MPMX19_06219: MPMX19_06219 - hypothetical protein, at 402,901 to 404,058
_06219
MPMX19_06220: MPMX19_06220 - Alpha-ketoglutaric semialdehyde dehydrogenase 2, at 404,255 to 405,835
_06220
Group
Condition
MPMX19
_06216
MPMX19
_06217
MPMX19
_06218
MPMX19
_06219
MPMX19
_06220
mgl
MGL
-0.8
-0.6
+0.3
-0.2
N.D.
mgl
MGL
+0.0
-1.1
+0.2
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.5
-0.3
-0.1
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
-0.2
-0.1
-0.1
N.D.
mgl
MGL
-0.5
-0.1
-0.1
+0.2
N.D.
nln
NLN
-0.1
-0.4
+0.0
+0.0
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
-0.2
+0.0
+0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.2
-0.1
+0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.1
-0.3
+0.2
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.5
+0.1
+0.2
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
-0.1
+0.1
+0.1
N.D.
nf_with_fulln
NF_with_fullN
-0.5
+0.1
+0.1
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
-0.1
+0.2
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
+0.2
-0.2
+0.1
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.5
+0.1
+0.2
+0.1
N.D.
nln
NLN
-0.3
-0.0
+0.3
-0.0
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
-0.0
-0.2
+0.1
N.D.
mgl
MGL
+0.3
-0.2
-0.1
+0.1
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
-0.2
+0.0
+0.2
N.D.
nln
NLN
+0.2
-0.2
+0.1
+0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.1
+0.2
+0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
+0.5
+0.4
+0.3
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.4
-0.0
+0.2
+0.0
N.D.
nf_with_fulln
NF_with_fullN
+0.4
-0.1
+0.3
+0.0
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.3
+0.2
+0.2
+0.0
N.D.
nf
NF
+0.4
+0.2
+0.0
+0.1
N.D.
mgl
MGL
+0.1
+0.2
+0.3
+0.1
N.D.
nf_with_fulln
NF_with_fullN
+0.4
+0.0
+0.3
+0.0
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.1
+0.6
+0.2
+0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.5
+0.3
+0.2
+0.0
N.D.
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