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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06211 and MPMX19_06212 are separated by 38 nucleotides
MPMX19_06212 and MPMX19_06213 are separated by 75 nucleotides
MPMX19_06213 and MPMX19_06214 are separated by 108 nucleotides
MPMX19_06214 and MPMX19_06215 overlap by 1 nucleotides
MPMX19_06211: MPMX19_06211 - tRNA-Ala, at 394,751 to 394,826
_06211
MPMX19_06212: MPMX19_06212 - tRNA-Leu, at 394,865 to 394,951
_06212
MPMX19_06213: MPMX19_06213 - Cardiolipin synthase B, at 395,027 to 396,661
_06213
MPMX19_06214: MPMX19_06214 - Aldose 1-epimerase, at 396,770 to 397,801
_06214
MPMX19_06215: MPMX19_06215 - Inner membrane ABC transporter permease protein YjfF, at 397,801 to 398,787
_06215
Group
Condition
MPMX19
_06211
MPMX19
_06212
MPMX19
_06213
MPMX19
_06214
MPMX19
_06215
mgl
MGL
-2.2
N.D.
+0.1
+0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-1.4
N.D.
+0.1
-0.1
-0.1
mgl
MGL
-0.9
N.D.
+0.1
-0.3
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.9
N.D.
-0.2
+0.2
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.7
N.D.
+0.1
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.8
N.D.
-0.0
+0.1
+0.1
mgl
MGL
-0.8
N.D.
-0.0
+0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.8
N.D.
+0.1
+0.3
-0.0
nln
NLN
-0.7
N.D.
+0.1
+0.2
+0.0
nl-ccm
NL-CCM, start OD=0.1
-0.4
N.D.
-0.1
-0.2
+0.2
nl-ccm_agar
NL-CCM_agar
-0.6
N.D.
-0.1
+0.3
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.8
N.D.
-0.0
+0.4
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
N.D.
+0.2
+0.1
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.6
N.D.
+0.0
+0.1
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.5
N.D.
+0.1
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
N.D.
+0.1
+0.3
-0.2
nl-ccm_agar
NL-CCM_agar
-0.5
N.D.
-0.1
+0.3
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
N.D.
-0.1
+0.4
+0.0
nl-ccm
NL-CCM, start OD=0.3
-0.4
N.D.
+0.1
+0.3
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
N.D.
+0.2
+0.2
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
N.D.
+0.2
+0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
N.D.
+0.2
+0.0
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
N.D.
+0.2
-0.0
-0.0
nl-ccm
NL-CCM, start OD=0.3
+0.2
N.D.
+0.2
+0.2
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.5
N.D.
+0.2
+0.1
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.6
N.D.
+0.1
+0.2
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.7
N.D.
+0.0
-0.1
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.7
N.D.
+0.1
+0.1
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.6
N.D.
+0.0
+0.2
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.6
N.D.
+0.1
+0.4
-0.0
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