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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06189 and MPMX19_06190 are separated by 44 nucleotides
MPMX19_06190 and MPMX19_06191 are separated by 7 nucleotides
MPMX19_06191 and MPMX19_06192 are separated by 12 nucleotides
MPMX19_06192 and MPMX19_06193 are separated by 27 nucleotides
MPMX19_06189: MPMX19_06189 - HTH-type transcriptional repressor NicR, at 380,239 to 380,700
_06189
MPMX19_06190: MPMX19_06190 - hypothetical protein, at 380,745 to 381,146
_06190
MPMX19_06191: MPMX19_06191 - hypothetical protein, at 381,154 to 381,936
_06191
MPMX19_06192: MPMX19_06192 - hypothetical protein, at 381,949 to 382,215
_06192
MPMX19_06193: MPMX19_06193 - Flagellar hook-basal body complex protein FliE, at 382,243 to 382,602
_06193
Group
Condition
MPMX19
_06189
MPMX19
_06190
MPMX19
_06191
MPMX19
_06192
MPMX19
_06193
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.0
-0.1
+0.0
-1.0
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.1
+0.1
-0.1
-1.0
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.2
+0.2
+0.1
-1.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.1
+0.1
+0.0
-1.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.1
-0.2
+0.1
-0.7
nf
NF
N.D.
-0.1
+0.2
+0.1
-0.8
mgl
MGL
N.D.
-0.3
-0.2
+0.6
-0.8
mgl
MGL
N.D.
-0.1
+0.1
+0.4
-0.6
mgl
MGL
N.D.
-0.1
-0.3
+0.5
+0.1
mgl
MGL
N.D.
+0.1
-0.3
+0.5
-0.1
nl-ccm
NL-CCM, start OD=0.3
N.D.
+0.1
-0.4
+0.2
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.3
+0.4
-0.2
+0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.0
-0.2
-0.3
+0.9
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.2
-0.4
+0.5
+0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.1
-0.2
+0.3
+0.6
mgl
MGL
N.D.
-0.1
+0.4
-0.2
+0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.1
-0.0
+0.2
+0.6
nf_with_fulln
NF_with_fullN
N.D.
+0.1
+0.1
-0.1
+0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.0
-0.1
+0.3
+0.6
nl-ccm
NL-CCM, start OD=0.1
N.D.
+0.2
+0.3
-0.1
+0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.0
+0.2
+0.2
+0.6
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
+0.2
+0.0
+0.2
+0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.1
-0.0
+0.2
+0.7
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
+0.0
+0.1
+0.2
+0.6
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.0
+0.3
+0.1
+0.7
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.0
-0.0
+0.1
+0.9
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.1
+0.1
+0.2
+0.7
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.0
+0.2
+0.2
+0.9
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.1
+0.3
+0.2
+0.8
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.3
+0.1
+0.5
+0.7
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