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Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06180 and MPMX19_06181 overlap by 14 nucleotides
MPMX19_06181 and MPMX19_06182 are separated by 22 nucleotides
MPMX19_06182 and MPMX19_06183 overlap by 4 nucleotides
MPMX19_06183 and MPMX19_06184 are separated by 226 nucleotides
MPMX19_06180: MPMX19_06180 - Sensor histidine kinase RegB, at 370,046 to 371,323
_06180
MPMX19_06181: MPMX19_06181 - Photosynthetic apparatus regulatory protein RegA, at 371,310 to 371,864
_06181
MPMX19_06182: MPMX19_06182 - Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase, at 371,887 to 372,717
_06182
MPMX19_06183: MPMX19_06183 - Phosphoglucosamine mutase, at 372,714 to 374,087
_06183
MPMX19_06184: MPMX19_06184 - hypothetical protein, at 374,314 to 375,471
_06184
Group
Condition
MPMX19
_06180
MPMX19
_06181
MPMX19
_06182
MPMX19
_06183
MPMX19
_06184
mgl
MGL
-1.6
N.D.
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-1.3
N.D.
N.D.
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.1
-1.1
N.D.
N.D.
N.D.
N.D.
mgl
MGL
-0.8
N.D.
N.D.
N.D.
N.D.
mgl
MGL
-0.7
N.D.
N.D.
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.7
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.7
N.D.
N.D.
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.6
N.D.
N.D.
N.D.
N.D.
nf_with_fulln
NF_with_fullN
-0.6
N.D.
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.5
N.D.
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.5
N.D.
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.5
N.D.
N.D.
N.D.
N.D.
nln
NLN
-0.4
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
N.D.
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
N.D.
N.D.
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
N.D.
N.D.
N.D.
N.D.
nf_with_fulln
NF_with_fullN
-0.4
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.4
N.D.
N.D.
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
+0.4
N.D.
N.D.
N.D.
N.D.
mgl
MGL
+0.5
N.D.
N.D.
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.5
N.D.
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
N.D.
N.D.
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
+0.7
N.D.
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.7
N.D.
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.7
N.D.
N.D.
N.D.
N.D.
nf
NF
+0.7
N.D.
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.7
N.D.
N.D.
N.D.
N.D.
nln
NLN
+0.8
N.D.
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+1.4
N.D.
N.D.
N.D.
N.D.
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