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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06115 and MPMX19_06116 are separated by 9 nucleotides
MPMX19_06116 and MPMX19_06117 overlap by 1 nucleotides
MPMX19_06117 and MPMX19_06118 are separated by 147 nucleotides
MPMX19_06118 and MPMX19_06119 are separated by 2 nucleotides
MPMX19_06115: MPMX19_06115 - hypothetical protein, at 301,031 to 301,990
_06115
MPMX19_06116: MPMX19_06116 - putative ribonucleotide transport ATP-binding protein mkl, at 302,000 to 302,821
_06116
MPMX19_06117: MPMX19_06117 - hypothetical protein, at 302,821 to 304,089
_06117
MPMX19_06118: MPMX19_06118 - Adenine phosphoribosyltransferase, at 304,237 to 304,752
_06118
MPMX19_06119: MPMX19_06119 - Inner membrane protein YphA, at 304,755 to 305,204
_06119
Group
Condition
MPMX19
_06115
MPMX19
_06116
MPMX19
_06117
MPMX19
_06118
MPMX19
_06119
mgl
MGL
+0.3
-1.1
-0.2
-0.6
N.D.
mgl
MGL
+0.3
-0.7
-0.1
-0.5
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.5
-0.1
-0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.2
+0.0
-0.6
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.5
+0.0
-0.3
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.2
-0.3
-0.0
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
-0.2
+0.0
-0.4
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.0
-0.0
-0.5
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
-0.1
-0.1
-0.4
N.D.
nl-ccm_agar
NL-CCM_agar
+0.1
+0.1
+0.1
-0.6
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.3
+0.2
-0.3
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.2
-0.0
-0.5
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
-0.0
-0.4
N.D.
mgl
MGL
+0.2
-0.0
+0.1
-0.4
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.3
+0.1
-0.4
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
+0.2
+0.1
-0.3
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.4
+0.0
-0.4
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.0
+0.4
-0.1
-0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.6
+0.2
-0.7
N.D.
nf_with_fulln
NF_with_fullN
+0.2
+0.2
+0.3
-0.4
N.D.
nf_with_fulln
NF_with_fullN
+0.3
+0.2
+0.2
-0.3
N.D.
nf_with_fulln
NF_with_fullN
+0.1
+0.3
+0.2
-0.3
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.2
+0.2
+0.6
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.7
+0.2
-0.4
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.6
+0.1
-0.2
N.D.
nf_with_fulln
NF_with_fullN
+0.3
+0.3
+0.3
-0.3
N.D.
nln
NLN
+0.1
+0.5
+0.0
+0.1
N.D.
nf_with_fulln
NF_with_fullN
+0.2
+0.3
+0.2
+0.0
N.D.
nf_with_fulln
NF_with_fullN
+0.3
+0.3
+0.2
-0.0
N.D.
nl-ccm
NL-CCM, start OD=0.3
+0.3
+0.6
+0.1
+0.3
N.D.
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