Fitness for 5 genes in Azospirillum sp. SherDot2

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Top 30 experiments (either direction), sorted by average fitness

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500 ntMPMX19_06088 and MPMX19_06089 overlap by 4 nucleotidesMPMX19_06089 and MPMX19_06090 are separated by 174 nucleotidesMPMX19_06090 and MPMX19_06091 are separated by 478 nucleotidesMPMX19_06091 and MPMX19_06092 are separated by 82 nucleotides MPMX19_06088: MPMX19_06088 - Sensor histidine kinase RcsC, at 263,417 to 267,214 _06088 MPMX19_06089: MPMX19_06089 - Regulatory protein LuxO, at 267,211 to 268,653 _06089 MPMX19_06090: MPMX19_06090 - Pyruvate dehydrogenase complex repressor, at 268,828 to 269,598 _06090 MPMX19_06091: MPMX19_06091 - Glycolate permease GlcA, at 270,077 to 271,753 _06091 MPMX19_06092: MPMX19_06092 - hypothetical protein, at 271,836 to 274,697 _06092
Group Condition MPMX19_06088 MPMX19_06089 MPMX19_06090 MPMX19_06091 MPMX19_06092
mgl MGL +0.1 -0.0 -2.7 +0.3 -0.1
nf_with_fulln NF_with_fullN -0.2 -0.2 -1.4 +0.1 -0.5
nf_with_fulln NF_with_fullN -0.3 -0.3 -1.3 +0.2 -0.3
mgl MGL +0.0 -0.5 -1.1 -0.2 -0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.1 +0.3 -1.7 -0.1 -0.1
nf_with_fulln NF_with_fullN -0.2 -0.1 -1.1 +0.1 -0.3
nf_with_fulln NF_with_fullN -0.2 -0.2 -1.1 +0.2 -0.3
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.2 +0.1 -1.1 -0.1 -0.3
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.1 -0.3 -1.0 -0.1 -0.0
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.2 -0.1 -0.9 -0.0 -0.4
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum -0.0 +0.1 -1.4 -0.1 -0.0
nf_with_fulln NF_with_fullN -0.1 -0.3 -1.0 +0.2 -0.2
mgl MGL +0.1 -0.2 -1.6 +0.3 +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.2 +0.2 -0.8 -0.3 -0.2
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.0 +0.1 -1.4 +0.1 +0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.1 -0.2 -0.9 -0.3 +0.1
nl-ccm; spin-x control NL-CCM; spin-x control -0.1 +0.2 -0.8 -0.2 -0.2
nln NLN +0.1 +0.1 -1.2 -0.2 +0.0
nl-ccm; low oxygen NL-CCM; low oxygen -0.0 +0.1 -1.0 +0.0 -0.2
nf_with10percent_fulln NF_with10percent_fullN -0.2 -0.5 -0.7 +0.1 +0.2
nl-ccm_agar NL-CCM_agar +0.1 +0.2 -1.6 +0.2 +0.1
nf_with10percent_fulln NF_with10percent_fullN -0.1 +0.0 -1.0 +0.0 +0.2
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 +0.1 -1.1 +0.1 +0.1
nf NF -0.0 +0.1 -1.0 +0.1 +0.1
nf_with10percent_fulln NF_with10percent_fullN +0.0 -0.1 -1.0 +0.1 +0.4
nl-ccm_agar NL-CCM_agar +0.1 +0.0 -0.8 +0.3 -0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.0 +0.2 -0.7 -0.0 +0.3
nl-ccm; spin-x control NL-CCM; spin-x control -0.1 -0.1 +0.6 -0.3 -0.1
mgl MGL +0.1 +0.4 +0.6 -0.4 -0.4
mgl MGL +0.1 -0.3 +0.7 +0.2 +0.2
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