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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06075 and MPMX19_06076 overlap by 1 nucleotides
MPMX19_06076 and MPMX19_06077 are separated by 35 nucleotides
MPMX19_06077 and MPMX19_06078 are separated by 169 nucleotides
MPMX19_06078 and MPMX19_06079 are separated by 212 nucleotides
MPMX19_06075: MPMX19_06075 - HTH-type transcriptional regulator HexR, at 244,362 to 245,288
_06075
MPMX19_06076: MPMX19_06076 - KHG/KDPG aldolase, at 245,288 to 245,941
_06076
MPMX19_06077: MPMX19_06077 - Sensor histidine kinase RcsC, at 245,977 to 249,438
_06077
MPMX19_06078: MPMX19_06078 - Putative amino-acid ABC transporter-binding protein YhdW, at 249,608 to 250,675
_06078
MPMX19_06079: MPMX19_06079 - Sialic acid transporter NanT, at 250,888 to 252,603
_06079
Group
Condition
MPMX19
_06075
MPMX19
_06076
MPMX19
_06077
MPMX19
_06078
MPMX19
_06079
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
-0.2
-0.4
-0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.1
-0.3
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
-0.3
-0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
-0.1
-0.2
-0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.2
-0.0
-0.3
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.1
-0.1
-0.3
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
-0.3
+0.0
-0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.1
-0.1
-0.2
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.1
-0.1
-0.2
mgl
MGL
N.D.
N.D.
-0.1
-0.4
+0.1
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
-0.0
-0.5
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
-0.3
+0.0
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.2
+0.0
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
-0.2
-0.1
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
-0.3
+0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.2
+0.2
+0.1
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
-0.2
+0.3
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
-0.1
+0.3
-0.1
mgl
MGL
N.D.
N.D.
+0.3
-0.2
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
-0.1
+0.2
+0.1
nln
NLN
N.D.
N.D.
-0.1
+0.3
+0.0
mgl
MGL
N.D.
N.D.
+0.2
-0.2
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.0
+0.3
-0.1
mgl
MGL
N.D.
N.D.
+0.1
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.2
+0.3
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
-0.0
+0.4
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.0
+0.3
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
+0.1
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
-0.1
+0.4
+0.1
mgl
MGL
N.D.
N.D.
+0.0
+0.3
+0.1
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