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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06059 and MPMX19_06060 are separated by 39 nucleotides
MPMX19_06060 and MPMX19_06061 are separated by 72 nucleotides
MPMX19_06061 and MPMX19_06062 are separated by 71 nucleotides
MPMX19_06062 and MPMX19_06063 overlap by 1 nucleotides
MPMX19_06059: MPMX19_06059 - Mannitol 2-dehydrogenase, at 224,768 to 226,282
_06059
MPMX19_06060: MPMX19_06060 - Starvation-sensing protein RspB, at 226,322 to 227,350
_06060
MPMX19_06061: MPMX19_06061 - Solute-binding protein, at 227,423 to 228,448
_06061
MPMX19_06062: MPMX19_06062 - hypothetical protein, at 228,520 to 229,023
_06062
MPMX19_06063: MPMX19_06063 - C4-dicarboxylate TRAP transporter large permease protein DctM, at 229,023 to 230,297
_06063
Group
Condition
MPMX19
_06059
MPMX19
_06060
MPMX19
_06061
MPMX19
_06062
MPMX19
_06063
nl-ccm
NL-CCM, start OD=0.1
-0.0
+0.0
-0.3
-0.0
-0.3
mgl
MGL
-0.1
-0.2
-0.2
+0.1
-0.0
nln
NLN
-0.0
-0.0
-0.2
-0.3
+0.0
nf_with_fulln
NF_with_fullN
-0.1
-0.1
-0.2
+0.0
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.1
-0.4
+0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.3
-0.4
-0.0
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.2
+0.1
+0.1
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.1
-0.6
+0.3
-0.1
nf_with_fulln
NF_with_fullN
-0.2
+0.2
-0.2
+0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.1
-0.4
+0.2
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
-0.1
+0.1
+0.3
-0.2
mgl
MGL
+0.3
-0.4
+0.1
+0.1
-0.1
nl-ccm_agar
NL-CCM_agar
+0.1
+0.1
+0.1
-0.1
-0.3
mgl
MGL
-0.1
-0.1
+0.3
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
+0.0
+0.2
+0.1
-0.3
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.1
-0.1
+0.4
-0.1
nln
NLN
+0.1
-0.1
+0.1
+0.3
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
+0.3
+0.0
+0.2
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.1
+0.1
+0.2
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.3
-0.1
+0.3
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.1
+0.3
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
+0.0
+0.2
+0.4
-0.1
nl-ccm_agar
NL-CCM_agar
+0.1
+0.3
+0.0
+0.2
-0.1
mgl
MGL
+0.1
-0.0
+0.2
+0.4
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.2
-0.2
+0.4
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.0
+0.2
+0.4
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.1
+0.1
+0.3
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.1
+0.4
+0.1
+0.1
nf_with_fulln
NF_with_fullN
+0.2
+0.2
-0.0
+0.2
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.2
+0.4
+0.4
-0.0
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