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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_06052 and MPMX19_06053 are separated by 148 nucleotides
MPMX19_06053 and MPMX19_06054 are separated by 632 nucleotides
MPMX19_06054 and MPMX19_06055 are separated by 112 nucleotides
MPMX19_06055 and MPMX19_06056 overlap by 4 nucleotides
MPMX19_06052: MPMX19_06052 - hypothetical protein, at 216,724 to 217,608
_06052
MPMX19_06053: MPMX19_06053 - hypothetical protein, at 217,757 to 218,818
_06053
MPMX19_06054: MPMX19_06054 - hypothetical protein, at 219,451 to 220,641
_06054
MPMX19_06055: MPMX19_06055 - Vitamin B12 import ATP-binding protein BtuD, at 220,754 to 221,821
_06055
MPMX19_06056: MPMX19_06056 - Putrescine transport system permease protein PotH, at 221,818 to 222,720
_06056
Group
Condition
MPMX19
_06052
MPMX19
_06053
MPMX19
_06054
MPMX19
_06055
MPMX19
_06056
nf_with_fulln
NF_with_fullN
-0.4
-0.6
-0.3
-0.1
-0.4
nf_with_fulln
NF_with_fullN
-0.5
-0.3
-0.3
-0.1
-0.2
nf_with_fulln
NF_with_fullN
-0.4
-0.4
-0.3
+0.0
-0.1
nf
NF
+0.0
-0.7
-0.2
-0.1
-0.3
nf_with_fulln
NF_with_fullN
-0.4
-0.3
-0.2
+0.0
-0.2
nf_with_fulln
NF_with_fullN
-0.5
-0.5
-0.1
+0.2
-0.2
nf_with_fulln
NF_with_fullN
-0.3
-0.5
-0.2
+0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
-0.4
-0.2
-0.1
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.3
-0.1
-0.3
+0.1
nln
NLN
-0.1
-0.3
-0.2
+0.0
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
-0.6
-0.0
+0.1
-0.1
nln
NLN
-0.2
-0.3
-0.1
+0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
-0.2
-0.1
-0.0
-0.2
nl-ccm_agar
NL-CCM_agar
-0.0
-0.3
-0.1
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.2
-0.2
-0.2
+0.1
nln
NLN
-0.2
-0.3
-0.1
+0.1
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.2
-0.1
+0.2
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.3
-0.0
-0.1
+0.3
mgl
MGL
+0.1
-0.0
-0.1
-0.3
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.0
-0.5
+0.1
+0.1
+0.2
nl-ccm
NL-CCM, start OD=0.1
+0.1
-0.0
-0.1
+0.2
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.2
-0.1
+0.2
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.8
-0.3
-0.5
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.2
-0.0
+0.2
+0.1
mgl
MGL
+0.2
+0.1
+0.0
-0.2
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.9
-0.1
-0.6
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.5
-0.3
+0.0
-0.0
mgl
MGL
+0.3
+0.3
+0.0
+0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.8
-0.0
-0.0
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.8
+0.0
+0.4
-0.0
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MPMX19_06054
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