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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05977 and MPMX19_05978 are separated by 7 nucleotides
MPMX19_05978 and MPMX19_05979 are separated by 7 nucleotides
MPMX19_05979 and MPMX19_05980 are separated by 302 nucleotides
MPMX19_05980 and MPMX19_05981 are separated by 20 nucleotides
MPMX19_05977: MPMX19_05977 - hypothetical protein, at 129,981 to 131,711
_05977
MPMX19_05978: MPMX19_05978 - C4-dicarboxylate transport transcriptional regulatory protein DctD, at 131,719 to 133,101
_05978
MPMX19_05979: MPMX19_05979 - C4-dicarboxylate transport sensor protein DctB, at 133,109 to 134,899
_05979
MPMX19_05980: MPMX19_05980 - 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial, at 135,202 to 135,822
_05980
MPMX19_05981: MPMX19_05981 - hypothetical protein, at 135,843 to 137,051
_05981
Group
Condition
MPMX19
_05977
MPMX19
_05978
MPMX19
_05979
MPMX19
_05980
MPMX19
_05981
nln
NLN
-0.0
-0.5
-0.1
+0.1
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.2
-0.2
+0.1
-0.1
nl-ccm
NL-CCM, start OD=0.1
+0.1
-0.1
-0.2
-0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
+0.1
-0.3
+0.1
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.1
-0.2
+0.2
-0.1
nl-ccm_agar
NL-CCM_agar
+0.0
-0.2
-0.1
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
+0.1
-0.2
+0.2
-0.1
nf_with_fulln
NF_with_fullN
-0.0
-0.2
-0.2
+0.2
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
+0.1
-0.1
+0.2
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.1
-0.2
+0.2
-0.0
nf
NF
-0.0
-0.1
-0.1
+0.3
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.1
-0.1
+0.2
-0.1
nln
NLN
+0.2
-0.2
+0.0
+0.2
-0.1
nf_with_fulln
NF_with_fullN
-0.0
+0.1
-0.0
+0.3
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.1
+0.1
+0.4
-0.1
mgl
MGL
+0.1
+0.2
-0.2
+0.3
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.3
-0.0
+0.2
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.1
+0.1
+0.2
-0.2
mgl
MGL
+0.1
+0.3
-0.4
+0.3
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
+0.2
-0.1
+0.2
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.2
+0.1
+0.4
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
+0.3
-0.1
+0.1
+0.0
mgl
MGL
+0.1
-0.2
+0.2
+0.2
+0.1
nl-ccm_agar
NL-CCM_agar
-0.0
+0.3
+0.0
+0.3
-0.1
mgl
MGL
-0.0
+0.1
+0.1
+0.4
-0.1
nf
NF
-0.1
+0.3
+0.1
+0.2
+0.1
mgl
MGL
-0.1
+0.2
+0.1
+0.2
+0.0
mgl
MGL
-0.0
+0.3
+0.3
+0.2
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.2
-0.3
+0.6
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.1
+0.2
+0.3
-0.1
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