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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05941 and MPMX19_05942 are separated by 185 nucleotides
MPMX19_05942 and MPMX19_05943 are separated by 159 nucleotides
MPMX19_05943 and MPMX19_05944 are separated by 329 nucleotides
MPMX19_05944 and MPMX19_05945 are separated by 28 nucleotides
MPMX19_05941: MPMX19_05941 - hypothetical protein, at 85,354 to 86,442
_05941
MPMX19_05942: MPMX19_05942 - hypothetical protein, at 86,628 to 88,022
_05942
MPMX19_05943: MPMX19_05943 - 3-hydroxybutyryl-CoA dehydrogenase, at 88,182 to 89,048
_05943
MPMX19_05944: MPMX19_05944 - hypothetical protein, at 89,378 to 90,388
_05944
MPMX19_05945: MPMX19_05945 - Putative aliphatic sulfonates transport permease protein SsuC, at 90,417 to 91,250
_05945
Group
Condition
MPMX19
_05941
MPMX19
_05942
MPMX19
_05943
MPMX19
_05944
MPMX19
_05945
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
-0.3
-0.1
-0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
-0.1
-0.3
+0.1
-0.1
mgl
MGL
-0.2
-0.2
-0.1
-0.2
+0.1
mgl
MGL
-0.1
-0.2
-0.2
-0.0
-0.1
nl-ccm_agar
NL-CCM_agar
-0.2
-0.1
-0.2
-0.1
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
-0.0
-0.1
-0.0
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
-0.0
-0.2
-0.2
-0.1
nf
NF
-0.3
-0.2
-0.0
+0.0
-0.1
nln
NLN
-0.3
-0.0
-0.2
+0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.2
+0.0
-0.1
-0.3
nf_with_fulln
NF_with_fullN
-0.2
+0.1
-0.2
-0.1
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.1
-0.2
-0.1
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.1
-0.1
-0.1
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.0
-0.3
-0.1
-0.0
nf_with_fulln
NF_with_fullN
-0.1
+0.1
-0.2
-0.1
+0.0
nl-ccm
NL-CCM, start OD=0.3
-0.1
-0.0
-0.2
-0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
+0.0
-0.2
+0.0
+0.1
nf
NF
+0.1
-0.1
-0.3
+0.0
+0.1
mgl
MGL
+0.0
-0.2
+0.3
-0.3
-0.0
mgl
MGL
-0.0
-0.1
-0.2
+0.2
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
-0.1
+0.2
+0.1
+0.0
nl-ccm
NL-CCM, start OD=0.1
+0.0
-0.1
+0.1
+0.1
-0.2
nf_with_fulln
NF_with_fullN
-0.2
+0.2
-0.1
-0.1
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.3
-0.1
-0.1
-0.1
-0.0
nl-ccm_agar
NL-CCM_agar
+0.2
-0.1
-0.0
+0.1
-0.1
nl-ccm
NL-CCM, start OD=0.1
+0.2
-0.1
+0.1
-0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.0
+0.4
+0.2
-0.1
mgl
MGL
+0.3
+0.1
+0.0
+0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.3
+0.3
+0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.3
+0.1
+0.1
+0.1
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