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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05921 and MPMX19_05922 are separated by 28 nucleotides
MPMX19_05922 and MPMX19_05923 are separated by 101 nucleotides
MPMX19_05923 and MPMX19_05924 are separated by 11 nucleotides
MPMX19_05924 and MPMX19_05925 are separated by 45 nucleotides
MPMX19_05921: MPMX19_05921 - hypothetical protein, at 55,548 to 56,270
_05921
MPMX19_05922: MPMX19_05922 - putative oxidoreductase/MSMEI_2347, at 56,299 to 57,135
_05922
MPMX19_05923: MPMX19_05923 - Vitamin B12 import ATP-binding protein BtuD, at 57,237 to 58,901
_05923
MPMX19_05924: MPMX19_05924 - hypothetical protein, at 58,913 to 59,992
_05924
MPMX19_05925: MPMX19_05925 - Nitrate/nitrite binding protein NrtA, at 60,038 to 61,453
_05925
Group
Condition
MPMX19
_05921
MPMX19
_05922
MPMX19
_05923
MPMX19
_05924
MPMX19
_05925
mgl
MGL
-2.7
+0.2
+0.3
-0.0
-0.1
nl-ccm_agar
NL-CCM_agar
-1.0
+0.0
-0.0
-0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
+0.2
-0.1
-0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.9
+0.1
+0.1
+0.4
-0.0
nln
NLN
-0.7
+0.1
+0.1
+0.2
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.9
+0.2
+0.1
+0.3
+0.0
nl-ccm
NL-CCM, start OD=0.1
-0.6
+0.2
+0.1
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.7
+0.3
+0.1
-0.0
+0.2
nf
NF
-0.6
-0.0
+0.2
+0.2
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.6
+0.2
+0.1
+0.0
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.7
+0.2
+0.2
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.6
+0.1
+0.3
+0.2
+0.0
nln
NLN
-0.5
+0.1
+0.2
+0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.6
+0.1
+0.2
+0.4
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
+0.2
+0.2
+0.3
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
+0.3
+0.1
+0.3
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
+0.2
-0.0
+0.3
+0.2
nl-ccm
NL-CCM, start OD=0.3
+0.2
+0.2
+0.3
-0.3
+0.1
nln
NLN
+0.6
+0.1
-0.2
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
+0.3
+0.4
+0.3
+0.1
nl-ccm_agar
NL-CCM_agar
+0.7
+0.1
-0.1
+0.2
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
+0.3
+0.2
+0.2
+0.1
nln
NLN
+0.6
+0.1
+0.1
+0.3
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.7
+0.1
+0.1
+0.1
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.9
-0.1
+0.2
+0.2
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.5
+0.0
+0.2
+0.4
+0.1
nl-ccm_agar
NL-CCM_agar
+0.4
+0.2
+0.1
+0.3
+0.2
mgl
MGL
+0.3
+0.1
+0.3
+0.4
+0.1
mgl
MGL
+1.1
+0.3
-0.1
+0.1
+0.0
mgl
MGL
+1.1
+0.2
+0.3
+0.1
+0.0
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