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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05875 and MPMX19_05876 are separated by 12 nucleotides
MPMX19_05876 and MPMX19_05877 are separated by 31 nucleotides
MPMX19_05877 and MPMX19_05878 are separated by 37 nucleotides
MPMX19_05878 and MPMX19_05879 are separated by 50 nucleotides
MPMX19_05875: MPMX19_05875 - Catabolite control protein A, at 5,115 to 6,215
_05875
MPMX19_05876: MPMX19_05876 - 2-ketogluconate reductase, at 6,228 to 7,166
_05876
MPMX19_05877: MPMX19_05877 - Glutamine transport ATP-binding protein GlnQ, at 7,198 to 7,986
_05877
MPMX19_05878: MPMX19_05878 - L-cystine-binding protein FliY, at 8,024 to 8,833
_05878
MPMX19_05879: MPMX19_05879 - L-cystine transport system permease protein YecS, at 8,884 to 9,537
_05879
Group
Condition
MPMX19
_05875
MPMX19
_05876
MPMX19
_05877
MPMX19
_05878
MPMX19
_05879
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.5
+0.3
-0.2
-0.4
mgl
MGL
-0.0
-1.2
+0.4
+0.4
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.3
+0.0
-0.2
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.1
-0.1
+0.1
-0.5
nl-ccm_agar
NL-CCM_agar
+0.2
+0.0
-0.4
+0.1
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.1
-0.2
+0.2
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
+0.0
-0.1
+0.4
-0.5
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.3
-0.1
-0.1
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.1
+0.1
+0.2
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.1
-0.2
+0.4
-0.0
mgl
MGL
-0.1
-0.3
+0.3
+0.2
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.2
+0.1
+0.2
-0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
+0.1
-0.1
+0.5
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
+0.2
+0.2
-0.1
-0.2
nln
NLN
+0.2
-0.2
-0.1
+0.2
+0.1
mgl
MGL
+0.1
-0.3
+0.2
-0.2
+0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.1
+0.2
+0.1
-0.3
mgl
MGL
-0.2
-0.6
+0.5
+0.1
+0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.3
-0.2
+0.3
-0.1
mgl
MGL
-0.2
+0.2
+0.3
+0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
+0.3
+0.2
+0.3
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
+0.4
-0.0
+0.4
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
+0.3
-0.0
+0.1
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.3
+0.5
+0.2
+0.1
nf_with_fulln
NF_with_fullN
+0.1
+0.1
+0.2
+0.3
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
+0.1
+0.1
+0.3
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.2
+0.3
+0.3
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.0
-0.0
+0.3
+0.5
mgl
MGL
-0.0
+0.6
-0.0
+0.0
+0.4
nln
NLN
+0.1
+0.4
-0.0
+0.3
+0.2
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