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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05870 and MPMX19_05871 are separated by 141 nucleotides
MPMX19_05871 and MPMX19_05872 are separated by 163 nucleotides
MPMX19_05872 and MPMX19_05873 are separated by 77 nucleotides
MPMX19_05873 and MPMX19_05874 are separated by 171 nucleotides
MPMX19_05870: MPMX19_05870 - hypothetical protein, at 1 to 930
_05870
MPMX19_05871: MPMX19_05871 - hypothetical protein, at 1,072 to 2,262
_05871
MPMX19_05872: MPMX19_05872 - Redox-sensitive transcriptional activator SoxR, at 2,426 to 2,881
_05872
MPMX19_05873: MPMX19_05873 - D-alanyl-D-alanine carboxypeptidase DacA, at 2,959 to 4,209
_05873
MPMX19_05874: MPMX19_05874 - 2-keto-4-pentenoate hydratase, at 4,381 to 5,118
_05874
Group
Condition
MPMX19
_05870
MPMX19
_05871
MPMX19
_05872
MPMX19
_05873
MPMX19
_05874
mgl
MGL
N.D.
-0.3
-2.3
-0.1
-0.0
mgl
MGL
N.D.
-0.4
-0.8
-0.3
-1.1
mgl
MGL
N.D.
+0.2
-1.2
-0.1
-1.0
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.3
-0.9
-0.2
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.2
-1.4
+0.1
-0.2
nl-ccm
NL-CCM, start OD=0.3
N.D.
+0.0
-0.8
-0.1
-0.8
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.1
-0.9
-0.1
-0.6
mgl
MGL
N.D.
-0.7
+0.1
-0.2
-0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.0
-0.7
-0.2
-0.6
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.0
-0.9
-0.1
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.5
-0.8
+0.0
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.0
-0.7
+0.0
-0.6
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
+0.0
-0.8
+0.0
-0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.4
-1.0
+0.1
+0.1
nl-ccm_agar
NL-CCM_agar
N.D.
-0.2
-0.7
+0.1
-0.3
nl-ccm_agar
NL-CCM_agar
N.D.
-0.0
-1.2
+0.1
-0.0
nf
NF
N.D.
-0.1
-1.1
-0.0
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.0
-0.9
+0.1
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.0
-0.8
+0.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.1
-0.6
+0.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.1
-1.2
+0.2
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.1
-0.6
+0.2
-0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.1
-0.5
+0.1
-0.6
nl-ccm_agar
NL-CCM_agar
N.D.
+0.1
-0.7
+0.2
-0.4
nf_with_fulln
NF_with_fullN
N.D.
+0.2
-0.7
+0.2
-0.3
nf
NF
N.D.
-0.2
-0.6
-0.1
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.0
-0.9
+0.0
+0.3
nf_with_fulln
NF_with_fullN
N.D.
-0.1
-0.8
+0.2
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.0
-0.6
+0.1
+0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.0
-0.5
+0.1
+0.6
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