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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05837 and MPMX19_05838 are separated by 112 nucleotides
MPMX19_05838 and MPMX19_05839 are separated by 69 nucleotides
MPMX19_05839 and MPMX19_05840 are separated by 161 nucleotides
MPMX19_05840 and MPMX19_05841 are separated by 151 nucleotides
MPMX19_05837: MPMX19_05837 - hypothetical protein, at 568,889 to 569,257
_05837
MPMX19_05838: MPMX19_05838 - hypothetical protein, at 569,370 to 570,341
_05838
MPMX19_05839: MPMX19_05839 - Chemoreceptor glutamine deamidase CheD, at 570,411 to 571,061
_05839
MPMX19_05840: MPMX19_05840 - hypothetical protein, at 571,223 to 572,704
_05840
MPMX19_05841: MPMX19_05841 - hypothetical protein, at 572,856 to 574,739
_05841
Group
Condition
MPMX19
_05837
MPMX19
_05838
MPMX19
_05839
MPMX19
_05840
MPMX19
_05841
nl-ccm
NL-CCM, start OD=0.3
+0.0
-0.2
-0.3
-0.2
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.4
-0.2
-0.2
+0.1
mgl
MGL
+0.3
-0.2
-0.5
-0.2
+0.0
nl-ccm_agar
NL-CCM_agar
+0.2
-0.2
-0.5
-0.1
-0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
-0.5
-0.1
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.1
-0.3
-0.0
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.5
+0.2
-0.0
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
-0.4
-0.0
-0.1
-0.1
mgl
MGL
-0.2
-0.3
+0.3
+0.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.2
-0.3
-0.2
-0.1
mgl
MGL
+0.4
-0.2
+0.0
-0.2
-0.2
nl-ccm_agar
NL-CCM_agar
+0.3
-0.1
-0.3
+0.1
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.3
+0.0
-0.3
-0.0
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
-0.3
+0.5
-0.1
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
-0.1
+0.2
-0.2
-0.2
nf_with_fulln
NF_with_fullN
+0.5
-0.1
-0.3
+0.1
-0.2
nln
NLN
+0.3
-0.1
-0.0
+0.2
-0.2
nln
NLN
+0.2
-0.1
+0.0
+0.3
-0.2
nf_with_fulln
NF_with_fullN
+0.5
+0.1
-0.3
+0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
+0.1
-0.5
+0.1
+0.1
mgl
MGL
+0.1
+0.2
+0.0
+0.2
-0.3
nf_with_fulln
NF_with_fullN
+0.4
-0.0
-0.2
+0.3
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.8
+0.1
-0.7
+0.4
-0.1
nl-ccm
NL-CCM, start OD=0.1
-0.0
+0.4
+0.1
-0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
+0.0
-0.3
+0.2
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.2
-0.2
+0.2
+0.0
nf_with_fulln
NF_with_fullN
+0.4
+0.2
+0.1
+0.1
-0.1
nf_with_fulln
NF_with_fullN
+0.6
+0.1
-0.1
+0.3
-0.0
nf_with_fulln
NF_with_fullN
+0.7
-0.0
-0.1
+0.2
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.2
+0.3
+0.2
+0.1
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MPMX19_05839
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