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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05834 and MPMX19_05835 are separated by 251 nucleotides
MPMX19_05835 and MPMX19_05836 are separated by 219 nucleotides
MPMX19_05836 and MPMX19_05837 are separated by 82 nucleotides
MPMX19_05837 and MPMX19_05838 are separated by 112 nucleotides
MPMX19_05834: MPMX19_05834 - Hydrogen peroxide-inducible genes activator, at 565,070 to 565,981
_05834
MPMX19_05835: MPMX19_05835 - Alkyl hydroperoxide reductase C, at 566,233 to 566,796
_05835
MPMX19_05836: MPMX19_05836 - Alkyl hydroperoxide reductase subunit F, at 567,016 to 568,806
_05836
MPMX19_05837: MPMX19_05837 - hypothetical protein, at 568,889 to 569,257
_05837
MPMX19_05838: MPMX19_05838 - hypothetical protein, at 569,370 to 570,341
_05838
Group
Condition
MPMX19
_05834
MPMX19
_05835
MPMX19
_05836
MPMX19
_05837
MPMX19
_05838
mgl
MGL
-3.5
-0.9
-0.5
+0.4
-0.2
mgl
MGL
-3.3
-0.7
-0.6
+0.3
-0.2
nl-ccm
NL-CCM, start OD=0.3
-1.2
-0.4
-0.4
+0.0
-0.2
mgl
MGL
-1.6
+0.1
-0.6
+0.1
-0.1
mgl
MGL
-1.4
-0.9
+0.1
+0.1
+0.2
mgl
MGL
-0.7
-0.1
-0.5
-0.2
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-1.6
-0.2
+0.0
-0.0
+0.2
nl-ccm
NL-CCM, start OD=0.3
-0.6
-0.4
+0.0
-0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.9
-0.2
-0.1
+0.1
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.9
+0.1
+0.0
-0.1
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.0
+0.0
-0.1
+0.2
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.5
-0.3
+0.1
+0.2
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.5
-0.6
-0.0
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
-0.4
-0.1
+0.3
-0.1
nl-ccm_agar
NL-CCM_agar
-0.1
-0.7
-0.1
+0.3
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
-0.6
-0.1
-0.0
-0.3
nf_with_fulln
NF_with_fullN
-1.1
-0.0
+0.1
+0.5
+0.1
nln
NLN
+0.3
-0.5
+0.1
+0.2
-0.1
nf_with_fulln
NF_with_fullN
-0.1
-0.2
-0.2
+0.6
+0.1
nf_with_fulln
NF_with_fullN
-0.5
-0.0
+0.1
+0.4
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.8
-0.2
+0.0
-0.1
-0.2
nf_with_fulln
NF_with_fullN
+0.4
-0.1
-0.2
+0.5
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.6
+0.0
+0.2
+0.2
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.4
+0.2
+0.2
+0.2
-0.1
nf_with_fulln
NF_with_fullN
+0.4
+0.1
+0.1
+0.7
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.9
-0.3
+0.8
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.9
-0.2
+0.6
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.6
+0.0
+0.5
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.8
+0.3
+0.3
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.8
+0.1
+0.6
+0.1
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