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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05746 and MPMX19_05747 are separated by 147 nucleotides
MPMX19_05747 and MPMX19_05748 are separated by 315 nucleotides
MPMX19_05748 and MPMX19_05749 overlap by 4 nucleotides
MPMX19_05749 and MPMX19_05750 are separated by 87 nucleotides
MPMX19_05746: MPMX19_05746 - hypothetical protein, at 466,052 to 467,893
_05746
MPMX19_05747: MPMX19_05747 - Transcriptional regulatory protein DegU, at 468,041 to 468,763
_05747
MPMX19_05748: MPMX19_05748 - Response regulator SaeR, at 469,079 to 469,543
_05748
MPMX19_05749: MPMX19_05749 - Cyclic di-GMP phosphodiesterase response regulator RpfG, at 469,540 to 470,607
_05749
MPMX19_05750: MPMX19_05750 - hypothetical protein, at 470,695 to 471,114
_05750
Group
Condition
MPMX19
_05746
MPMX19
_05747
MPMX19
_05748
MPMX19
_05749
MPMX19
_05750
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
-1.1
-0.0
-0.1
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
-0.1
-0.8
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.5
-0.5
+0.0
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.6
+0.1
-0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
-0.1
-0.6
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.3
-0.9
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
+0.3
-0.8
-0.3
+0.1
nln
NLN
-0.0
-0.8
+0.4
-0.4
-0.0
nf_with_fulln
NF_with_fullN
-0.0
-0.8
+0.3
-0.1
-0.2
nl-ccm_agar
NL-CCM_agar
-0.0
+0.2
-0.9
+0.1
-0.1
nln
NLN
-0.2
-0.4
+0.2
-0.4
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.7
+0.4
-0.4
+0.1
mgl
MGL
+0.3
-0.4
-0.6
+0.2
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
+0.3
-0.2
-0.3
-0.1
nf_with_fulln
NF_with_fullN
+0.0
-0.8
+0.4
+0.0
-0.2
nf
NF
+0.2
+0.2
-0.9
+0.0
-0.0
nln
NLN
+0.0
-0.6
+0.4
-0.2
-0.0
nf_with_fulln
NF_with_fullN
+0.1
-0.1
+0.4
-0.3
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
+0.3
+0.1
-0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.3
+0.2
-0.4
+0.2
mgl
MGL
+0.2
+0.6
-0.7
-0.0
+0.1
nf_with_fulln
NF_with_fullN
+0.2
-0.3
+0.5
+0.0
-0.1
nl-ccm_agar
NL-CCM_agar
+0.0
-0.4
+0.6
+0.0
+0.1
nf_with_fulln
NF_with_fullN
+0.4
-0.3
+0.6
+0.0
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.2
+0.6
-0.3
-0.0
nln
NLN
+0.3
-0.3
+0.5
+0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.2
+0.7
-0.2
-0.0
mgl
MGL
+0.4
+0.9
-0.5
-0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
-0.4
+0.5
+0.1
-0.0
nl-ccm
NL-CCM, start OD=0.1
+0.2
+0.1
+0.6
-0.0
-0.1
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