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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05600 and MPMX19_05601 overlap by 4 nucleotides
MPMX19_05601 and MPMX19_05602 are separated by 96 nucleotides
MPMX19_05602 and MPMX19_05603 are separated by 12 nucleotides
MPMX19_05603 and MPMX19_05604 are separated by 132 nucleotides
MPMX19_05600: MPMX19_05600 - hypothetical protein, at 310,206 to 311,006
_05600
MPMX19_05601: MPMX19_05601 - putative ABC transporter ATP-binding protein YejF, at 311,003 to 312,703
_05601
MPMX19_05602: MPMX19_05602 - Adaptive-response sensory-kinase SasA, at 312,800 to 313,885
_05602
MPMX19_05603: MPMX19_05603 - hypothetical protein, at 313,898 to 315,139
_05603
MPMX19_05604: MPMX19_05604 - hypothetical protein, at 315,272 to 316,474
_05604
Group
Condition
MPMX19
_05600
MPMX19
_05601
MPMX19
_05602
MPMX19
_05603
MPMX19
_05604
nln
NLN
N.D.
-1.1
-0.1
-0.1
+0.3
mgl
MGL
N.D.
-1.4
+0.0
-0.1
+0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.8
-0.0
-0.0
-0.0
mgl
MGL
N.D.
-0.4
+0.0
-0.2
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.3
-0.0
-0.0
-0.4
nln
NLN
N.D.
-0.2
-0.2
+0.0
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.6
+0.0
-0.1
+0.2
mgl
MGL
N.D.
-0.3
-0.1
+0.2
-0.2
nln
NLN
N.D.
-0.6
+0.1
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.7
+0.1
-0.0
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.5
+0.0
+0.0
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.4
-0.2
+0.1
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.5
+0.0
+0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.4
+0.1
-0.1
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.4
-0.1
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.5
+0.1
+0.0
+0.2
nl-ccm_agar
NL-CCM_agar
N.D.
-0.4
+0.1
+0.0
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.7
+0.1
+0.0
+0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.5
+0.2
+0.0
+0.2
mgl
MGL
N.D.
-0.2
-0.2
-0.2
+0.5
nf_with_fulln
NF_with_fullN
N.D.
+0.6
-0.0
+0.0
-0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.4
+0.1
+0.0
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.4
+0.0
+0.1
+0.3
nln
NLN
N.D.
+0.5
-0.1
-0.1
-0.1
nf_with_fulln
NF_with_fullN
N.D.
+0.5
+0.0
-0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.3
+0.3
-0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.6
+0.3
-0.1
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.5
+0.2
-0.1
-0.2
nf_with_fulln
NF_with_fullN
N.D.
+0.6
+0.0
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.2
+0.2
+0.2
+0.4
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