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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05594 and MPMX19_05595 are separated by 104 nucleotides
MPMX19_05595 and MPMX19_05596 are separated by 137 nucleotides
MPMX19_05596 and MPMX19_05597 are separated by 175 nucleotides
MPMX19_05597 and MPMX19_05598 are separated by 370 nucleotides
MPMX19_05594: MPMX19_05594 - hypothetical protein, at 304,610 to 306,085
_05594
MPMX19_05595: MPMX19_05595 - RNA polymerase sigma factor RpoH, at 306,190 to 307,071
_05595
MPMX19_05596: MPMX19_05596 - HTH-type transcriptional activator RhaS, at 307,209 to 307,949
_05596
MPMX19_05597: MPMX19_05597 - hypothetical protein, at 308,125 to 308,610
_05597
MPMX19_05598: MPMX19_05598 - hypothetical protein, at 308,981 to 309,343
_05598
Group
Condition
MPMX19
_05594
MPMX19
_05595
MPMX19
_05596
MPMX19
_05597
MPMX19
_05598
mgl
MGL
-0.5
+0.1
-0.2
-0.5
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.4
-0.1
-0.3
-1.1
mgl
MGL
-0.4
+0.1
-0.0
+0.0
-0.6
nln
NLN
-0.1
-0.3
-0.2
-0.2
+0.2
nf_with_fulln
NF_with_fullN
+0.1
-0.3
-0.1
-0.3
-0.0
mgl
MGL
-0.4
+0.0
+0.0
+0.0
-0.2
nf
NF
+0.2
-0.3
-0.2
-0.2
+0.1
mgl
MGL
-0.3
+0.3
-0.0
+0.1
-0.4
nln
NLN
-0.1
-0.3
-0.1
-0.2
+0.2
nf_with_fulln
NF_with_fullN
+0.2
-0.3
-0.0
+0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.7
-0.5
+0.0
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.5
-0.1
-0.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.1
+0.1
-0.0
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
+0.1
+0.0
-0.1
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.3
+0.1
+0.1
-0.2
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.1
+0.1
-0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
-0.2
+0.1
+0.2
+0.2
mgl
MGL
-0.1
-0.1
+0.2
+0.1
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.1
-0.2
+0.1
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.1
+0.1
+0.3
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.3
+0.3
+0.1
+0.4
mgl
MGL
+0.1
+0.2
-0.3
+0.1
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.0
+0.1
+0.3
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-0.2
+0.3
+0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.2
+0.1
+0.1
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
+0.0
+0.2
+0.2
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.4
+0.3
-0.2
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.1
+0.1
+0.4
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.2
+0.2
+0.3
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.1
+0.1
+0.3
+0.3
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