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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05560 and MPMX19_05561 overlap by 29 nucleotides
MPMX19_05561 and MPMX19_05562 are separated by 2 nucleotides
MPMX19_05562 and MPMX19_05563 overlap by 8 nucleotides
MPMX19_05563 and MPMX19_05564 are separated by 55 nucleotides
MPMX19_05560: MPMX19_05560 - hypothetical protein, at 269,395 to 269,634
_05560
MPMX19_05561: MPMX19_05561 - 5,6-dimethylbenzimidazole synthase, at 269,606 to 270,262
_05561
MPMX19_05562: MPMX19_05562 - Hydrogenobyrinate a,c-diamide synthase, at 270,265 to 271,578
_05562
MPMX19_05563: MPMX19_05563 - Uroporphyrinogen-III C-methyltransferase, at 271,571 to 272,386
_05563
MPMX19_05564: MPMX19_05564 - Cobalt-precorrin-5B C(1)-methyltransferase, at 272,442 to 273,554
_05564
Group
Condition
MPMX19
_05560
MPMX19
_05561
MPMX19
_05562
MPMX19
_05563
MPMX19
_05564
nf
NF
N.D.
-0.7
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.6
N.D.
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
-0.4
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.4
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.4
N.D.
N.D.
N.D.
nln
NLN
N.D.
-0.4
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.4
N.D.
N.D.
N.D.
mgl
MGL
N.D.
-0.4
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.4
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.3
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.3
N.D.
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.3
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.3
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.3
N.D.
N.D.
N.D.
mgl
MGL
N.D.
-0.3
N.D.
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.3
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.3
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.2
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.2
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.2
N.D.
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.2
N.D.
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.2
N.D.
N.D.
N.D.
mgl
MGL
N.D.
+0.3
N.D.
N.D.
N.D.
nln
NLN
N.D.
+0.3
N.D.
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
+0.3
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.3
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.3
N.D.
N.D.
N.D.
nf_with_fulln
NF_with_fullN
N.D.
+0.3
N.D.
N.D.
N.D.
nln
NLN
N.D.
+0.3
N.D.
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.4
N.D.
N.D.
N.D.
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