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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05401 and MPMX19_05402 are separated by 91 nucleotides
MPMX19_05402 and MPMX19_05403 are separated by 121 nucleotides
MPMX19_05403 and MPMX19_05404 overlap by 4 nucleotides
MPMX19_05404 and MPMX19_05405 overlap by 4 nucleotides
MPMX19_05401: MPMX19_05401 - 2-methylisocitrate lyase, at 81,725 to 82,570
_05401
MPMX19_05402: MPMX19_05402 - hypothetical protein, at 82,662 to 83,129
_05402
MPMX19_05403: MPMX19_05403 - hypothetical protein, at 83,251 to 84,000
_05403
MPMX19_05404: MPMX19_05404 - UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, at 83,997 to 85,154
_05404
MPMX19_05405: MPMX19_05405 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, at 85,151 to 85,906
_05405
Group
Condition
MPMX19
_05401
MPMX19
_05402
MPMX19
_05403
MPMX19
_05404
MPMX19
_05405
mgl
MGL
-0.5
-0.2
N.D.
-0.7
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
-0.1
N.D.
-0.4
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
-0.1
N.D.
-0.3
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.0
-0.3
N.D.
-0.4
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.2
N.D.
-0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.0
N.D.
-0.4
N.D.
nln
NLN
-0.1
-0.4
N.D.
-0.0
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
-0.3
N.D.
+0.2
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
+0.1
N.D.
-0.2
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
+0.1
N.D.
-0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
-0.3
N.D.
+0.2
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.2
+0.1
N.D.
-0.2
N.D.
nf
NF
+0.2
-0.2
N.D.
-0.3
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.1
N.D.
-0.6
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.1
N.D.
-0.6
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.3
N.D.
-0.1
N.D.
nf_with_fulln
NF_with_fullN
+0.2
+0.2
N.D.
-0.4
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.2
+0.4
N.D.
-0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
+0.1
N.D.
+0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.4
N.D.
-0.8
N.D.
nln
NLN
-0.1
+0.4
N.D.
-0.2
N.D.
nf_with_fulln
NF_with_fullN
+0.3
+0.5
N.D.
-0.6
N.D.
mgl
MGL
+0.3
-0.2
N.D.
+0.2
N.D.
nf_with_fulln
NF_with_fullN
+0.1
+0.3
N.D.
-0.2
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.2
N.D.
+0.4
N.D.
nf
NF
-0.2
+0.4
N.D.
+0.5
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
+0.1
N.D.
+0.2
N.D.
nf_with_fulln
NF_with_fullN
+0.3
+0.6
N.D.
-0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
+0.4
N.D.
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.3
N.D.
+0.2
N.D.
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