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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05397 and MPMX19_05398 are separated by 49 nucleotides
MPMX19_05398 and MPMX19_05399 are separated by 100 nucleotides
MPMX19_05399 and MPMX19_05400 are separated by 560 nucleotides
MPMX19_05400 and MPMX19_05401 are separated by 83 nucleotides
MPMX19_05397: MPMX19_05397 - Glutamine transport ATP-binding protein GlnQ, at 75,629 to 76,408
_05397
MPMX19_05398: MPMX19_05398 - HTH-type transcriptional regulatory protein GabR, at 76,458 to 77,972
_05398
MPMX19_05399: MPMX19_05399 - Protease synthase and sporulation protein PAI 2, at 78,073 to 78,696
_05399
MPMX19_05400: MPMX19_05400 - hypothetical protein, at 79,257 to 81,641
_05400
MPMX19_05401: MPMX19_05401 - 2-methylisocitrate lyase, at 81,725 to 82,570
_05401
Group
Condition
MPMX19
_05397
MPMX19
_05398
MPMX19
_05399
MPMX19
_05400
MPMX19
_05401
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.4
-0.2
-0.1
-0.2
mgl
MGL
N.D.
-0.7
-0.3
+0.1
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.1
-0.2
-0.1
-0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.3
-0.2
+0.0
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.3
+0.0
-0.2
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.2
+0.0
-0.1
-0.4
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.2
-0.2
+0.0
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.2
+0.0
-0.1
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.2
-0.0
-0.0
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.4
-0.0
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.2
-0.1
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.3
-0.0
+0.0
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.2
+0.0
-0.0
-0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.1
+0.0
-0.1
-0.3
mgl
MGL
N.D.
-0.4
+0.1
-0.0
-0.1
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.3
+0.1
+0.1
-0.2
mgl
MGL
N.D.
+0.1
+0.0
+0.1
-0.5
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.1
-0.0
-0.0
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.3
-0.2
-0.0
+0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.0
+0.2
+0.0
-0.4
nl-ccm_agar
NL-CCM_agar
N.D.
-0.1
+0.1
+0.0
-0.3
mgl
MGL
N.D.
-0.3
+0.3
-0.0
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.2
+0.1
-0.0
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.2
-0.0
-0.0
+0.3
mgl
MGL
N.D.
-0.2
+0.1
+0.0
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.1
-0.2
+0.2
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.1
+0.1
+0.1
+0.2
nf_with_fulln
NF_with_fullN
N.D.
+0.2
-0.0
+0.1
+0.3
nf_with_fulln
NF_with_fullN
N.D.
+0.2
+0.1
+0.0
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.1
+0.1
+0.1
+0.4
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