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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05344 and MPMX19_05345 are separated by 10 nucleotides
MPMX19_05345 and MPMX19_05346 are separated by 98 nucleotides
MPMX19_05346 and MPMX19_05347 are separated by 68 nucleotides
MPMX19_05347 and MPMX19_05348 are separated by 344 nucleotides
MPMX19_05344: MPMX19_05344 - HTH-type transcriptional regulator YofA, at 16,279 to 17,199
_05344
MPMX19_05345: MPMX19_05345 - hypothetical protein, at 17,210 to 17,923
_05345
MPMX19_05346: MPMX19_05346 - hypothetical protein, at 18,022 to 18,654
_05346
MPMX19_05347: MPMX19_05347 - hypothetical protein, at 18,723 to 19,607
_05347
MPMX19_05348: MPMX19_05348 - hypothetical protein, at 19,952 to 21,628
_05348
Group
Condition
MPMX19
_05344
MPMX19
_05345
MPMX19
_05346
MPMX19
_05347
MPMX19
_05348
mgl
MGL
-0.1
-0.2
-0.1
-0.5
N.D.
mgl
MGL
-0.3
+0.1
-0.8
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.0
-0.9
-0.0
N.D.
nln
NLN
-0.2
+0.1
-0.4
+0.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.0
-0.6
+0.1
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
+0.1
-0.6
+0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.3
-0.4
-0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.1
-0.5
+0.3
N.D.
mgl
MGL
-0.2
+0.0
-0.4
+0.3
N.D.
mgl
MGL
-0.1
+0.0
-0.7
+0.5
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.1
-0.6
+0.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.2
-0.2
+0.2
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.0
-0.5
+0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.1
-0.4
+0.2
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.2
-0.2
+0.3
N.D.
nln
NLN
+0.2
+0.0
-0.4
+0.2
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.0
-0.3
+0.2
N.D.
nln
NLN
+0.1
+0.2
-0.4
+0.3
N.D.
nf_with_fulln
NF_with_fullN
+0.2
+0.2
-0.3
+0.2
N.D.
mgl
MGL
-0.2
+0.1
+0.3
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
+0.1
-0.3
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
+0.1
-0.1
+0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.1
+0.3
+0.4
N.D.
mgl
MGL
+0.5
+0.3
-0.2
+0.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.2
+0.4
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
+0.1
+0.3
-0.1
N.D.
nf_with_fulln
NF_with_fullN
+0.1
+0.3
+0.1
+0.2
N.D.
nf_with_fulln
NF_with_fullN
-0.0
+0.3
+0.2
+0.4
N.D.
nl-ccm_agar
NL-CCM_agar
+0.3
+0.0
+0.3
+0.2
N.D.
nf_with_fulln
NF_with_fullN
+0.3
+0.3
+0.3
+0.3
N.D.
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