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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05332 and MPMX19_05333 are separated by 119 nucleotides
MPMX19_05333 and MPMX19_05334 are separated by 161 nucleotides
MPMX19_05334 and MPMX19_05335 overlap by 4 nucleotides
MPMX19_05335 and MPMX19_05336 overlap by 4 nucleotides
MPMX19_05332: MPMX19_05332 - HTH-type transcriptional regulator GntR, at 85 to 1,065
_05332
MPMX19_05333: MPMX19_05333 - Thymidine phosphorylase, at 1,185 to 2,675
_05333
MPMX19_05334: MPMX19_05334 - hypothetical protein, at 2,837 to 4,468
_05334
MPMX19_05335: MPMX19_05335 - hypothetical protein, at 4,465 to 5,736
_05335
MPMX19_05336: MPMX19_05336 - Ribosome-associated ATPase, at 5,733 to 8,570
_05336
Group
Condition
MPMX19
_05332
MPMX19
_05333
MPMX19
_05334
MPMX19
_05335
MPMX19
_05336
mgl
MGL
-1.1
-0.7
-0.1
-0.1
+0.2
mgl
MGL
-0.6
-1.0
-0.1
-0.1
+0.0
mgl
MGL
-1.1
-0.1
-0.0
-0.3
-0.1
mgl
MGL
-1.2
-0.5
+0.0
+0.0
+0.1
mgl
MGL
-0.6
-0.5
-0.1
-0.1
+0.0
nl-ccm
NL-CCM, start OD=0.3
+0.3
-1.3
-0.2
-0.0
+0.0
mgl
MGL
-0.7
-0.5
-0.1
+0.1
+0.1
nl-ccm_agar
NL-CCM_agar
+0.2
-0.9
-0.0
-0.0
+0.0
nl-ccm
NL-CCM, start OD=0.3
-0.4
-0.5
+0.1
+0.0
+0.2
nl-ccm_agar
NL-CCM_agar
+0.3
-0.5
-0.1
-0.1
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.7
+0.0
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-0.5
-0.0
-0.1
+0.1
nln
NLN
+0.3
-0.7
+0.1
+0.2
+0.1
nf_with_fulln
NF_with_fullN
+0.6
-0.8
+0.1
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.5
+0.7
-0.1
+0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
+0.7
+0.0
-0.0
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+1.2
-0.4
-0.1
-0.1
-0.0
nf
NF
-0.1
+0.7
+0.2
+0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+1.3
-0.3
+0.0
-0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.7
+0.1
+0.1
+0.1
nf
NF
-0.1
+0.8
+0.2
+0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.7
+0.1
+0.1
+0.1
nf_with_fulln
NF_with_fullN
+0.4
+0.5
+0.2
+0.0
+0.0
nf_with_fulln
NF_with_fullN
+0.7
-0.1
+0.3
+0.2
+0.1
nf_with_fulln
NF_with_fullN
+1.0
+0.1
+0.2
+0.1
+0.0
nln
NLN
+0.5
+0.7
+0.1
+0.1
+0.0
nf_with_fulln
NF_with_fullN
+0.7
+0.1
+0.3
+0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+1.2
+0.3
-0.1
+0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+1.3
+0.6
+0.2
-0.0
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+1.2
+0.8
+0.0
+0.1
+0.4
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