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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_05304 and MPMX19_05305 are separated by 180 nucleotides
MPMX19_05305 and MPMX19_05306 are separated by 179 nucleotides
MPMX19_05306 and MPMX19_05307 are separated by 325 nucleotides
MPMX19_05307 and MPMX19_05308 are separated by 105 nucleotides
MPMX19_05304: MPMX19_05304 - Transcriptional regulator SlyA, at 839,857 to 840,309
_05304
MPMX19_05305: MPMX19_05305 - Purine ribonucleoside efflux pump NepI, at 840,490 to 841,659
_05305
MPMX19_05306: MPMX19_05306 - RCS-specific HTH-type transcriptional activator RclR, at 841,839 to 842,753
_05306
MPMX19_05307: MPMX19_05307 - hypothetical protein, at 843,079 to 844,722
_05307
MPMX19_05308: MPMX19_05308 - Nucleoside triphosphate pyrophosphohydrolase, at 844,828 to 845,637
_05308
Group
Condition
MPMX19
_05304
MPMX19
_05305
MPMX19
_05306
MPMX19
_05307
MPMX19
_05308
nf_with_fulln
NF_with_fullN
N.D.
-0.0
-0.4
-0.1
-0.4
mgl
MGL
N.D.
-0.3
-0.0
-0.4
-0.1
nf_with_fulln
NF_with_fullN
N.D.
-0.0
-0.3
-0.4
-0.0
nln
NLN
N.D.
-0.2
-0.4
-0.2
+0.1
nln
NLN
N.D.
-0.1
-0.3
-0.3
-0.1
nf_with_fulln
NF_with_fullN
N.D.
+0.0
-0.2
-0.4
-0.1
nln
NLN
N.D.
-0.0
-0.1
-0.5
+0.1
nf
NF
N.D.
-0.1
-0.3
-0.2
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.3
-0.1
-0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.5
+0.1
-0.1
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.1
+0.2
-0.4
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.2
-0.1
+0.2
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.2
+0.5
-0.1
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.2
+0.5
-0.3
-0.2
mgl
MGL
N.D.
-0.1
-0.1
-0.5
+0.5
nln
NLN
N.D.
-0.5
-0.0
+0.2
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.1
-0.3
+0.0
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.2
-0.2
+0.1
+0.2
nl-ccm
NL-CCM, start OD=0.3
N.D.
+0.1
-0.2
-0.2
+0.2
mgl
MGL
N.D.
-0.2
-0.2
+0.3
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.3
+0.1
+0.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.1
+0.3
-0.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.0
+0.5
-0.4
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.1
-0.2
+0.4
-0.0
nl-ccm_agar
NL-CCM_agar
N.D.
-0.4
+0.5
+0.1
-0.0
mgl
MGL
N.D.
+0.1
+0.0
-0.2
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.1
-0.1
+0.4
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.1
+0.3
+0.2
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.1
+0.5
-0.0
+0.1
mgl
MGL
N.D.
-0.3
+0.2
+0.4
+0.2
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